Hi Cat - I hope this helps: http://www.mail-archive.com/freesurfer@nmr.mgh.harvard.edu/msg25987.html
a.y
On Tue, 22 Jan 2013, Cat Chong wrote:
Hello Experts, I am running bedpost x through fsl on the dmri directory (as advised in a previous post). I receive the fsl error message: “child process exited abnormally”. The command line error states:
switching from /8000_tracula/8000_tracula_out/8005_DTI/dmri to /8000_tracula/8000_tracula_out/8005_DTI bedpostx /8000_tracula/8000_tracula_out/8005_DTI/dmri -n 2 -w 1 -b 1000 /Applications/fsl/bin/bedpostx /8000_tracula/8000_tracula_out/8005_DTI/dmri -n 2 -w 1 -b 1000 subjectdir is /8000_tracula/8000_tracula_out/8005_DTI/dmri /8000_tracula/8000_tracula_out/8005_DTI/dmri/data not found
All the output files of the trac-all -prep stage are there, but could I have made a mistake on my configuration file? I have attached it.
Thank you very much for your help, Cheers, Cat