8 Jan
2020
8 Jan
'20
12:12 p.m.
External Email - Use Caution
Hi Bruce,
Thanks for the quick response.
I found that the problem was the input. If I use the EPI that it is coregistered to the T1 of Freesurfer instead of the EPI that it is also normalized to the MNI space, it works and I can project the surface (that I created with the command that I sent you) on fsaverage 5.
Could you confirm that the command has no errors?
mri_vol2surf --mov EPI.nii --reg register.dat --hemi [l/r]h --projfrac 0.5 --interp trilinear --trgsubject ico --icoorder 5 --o EPI_surface.mgh
Best wishes, Marina