External Email - Use Caution
Dear FreeSurfer Developers, I am processing MRI data using the freesurfer processing stream with two timepoints. I already executed the individual freesurfer-processing for each subject and timepoint and also the recon-all -base step. All finished without errors. When running the recon-all -long command, the processing stream exits at the same step in the script for all subjects and timepoints. I cannot identify a particular error message (ony at the end the script says exited with errors and no stats files are produced). I am using freesurfer 7.1.1 on an iMAc with macOS Catalina. Please find attached the recon-all log files for the longitudinal streams (2 folders with “long” in the foldername) as well as for the preparation steps.
Thank you.
---------------------------------------------------
PD Dr. med. Susanne Gellißen
Department of Diagnostic and Interventional Neuroradiology University Medical Center Hamburg-Eppendorf Martinistraße 52, 20246 Hamburg E-mail: s.siemonsen@uke.de
--
_____________________________________________________________________
Universitätsklinikum Hamburg-Eppendorf; Körperschaft des öffentlichen Rechts; Gerichtsstand: Hamburg | http://secure-web.cisco.com/1HvVVbdMRr6qAu-L5y0c3HUFOZFKnzwzd2mFmsc4xoj1PMvH... Vorstandsmitglieder: Prof. Dr. Burkhard Göke (Vorsitzender), Joachim Prölß, Prof. Dr. Blanche Schwappach-Pignataro, Marya Verdel _____________________________________________________________________
SAVE PAPER - THINK BEFORE PRINTING