Re: [Freesurfer] Extracting ROI information using created label

Hi Clint

you can do this with mris_anatomical_stats -l <label name> ...

cheers Bruce

p.s. and you can use mri_label2label to map the label from one subject to others

On Thu, 27 Mar 2014, Clint Johns wrote:

Hi, We are having some trouble extracting ROI (thickness) information using a label we created. After conducting a group analysis, we drew an ROI label based on the results. We used tksurfer to draw the label (we couldn't do this in freeview, which would freeze for some reason). However, at this point we're kind of stuck. The tutorial slides give the way to extract ROI information using existing labels, and then how to create a label, but not how to use the custom label to extract the relevant information.

Any advice would be appreciated!

Thanks,

Clint

-- I remain...

Clinton L. Johns, Ph.D. Research Scientist, Haskins Laboratories 300 George Street New Haven     CT     06511 speech:     203-865-6163 x240 fax:     203-865-8963 net:     johns@haskins.yale.edu