Re: [Freesurfer] patch for ribbon mgz failure. SAME ERROR

Hi Doug,

As you suggested, I copied the mri_segstats patch (mri_segstats.centos6_x86_64 because my system is centos6) to my freesurfer/bin location and reran the pipeline. However, I'm getting the same issue. Autorecon2 seems unable to create the ribbon.mgz file. Do you have any other suggestions for fixing this error? Attached you can find the recon-all.log file

Thanks, Gloria

Da: "Douglas N Greve" greve@nmr.mgh.harvard.edu A: "freesurfer" freesurfer@nmr.mgh.harvard.edu Inviato: Martedì, 5 settembre 2017 18:09:31 Oggetto: Re: [Freesurfer] patch for ribbon mgz failure

Use the mri_segstats from this URL that is appropriate for your system (eg, if you're running centos6, the download that patch and copy it to mri_segstats)

https://surfer.nmr.mgh.harvard.edu/pub/dist/freesurfer/5.3.0-patch/

On 08/30/2017 06:32 AM, Maria Gloria Rossetti wrote:

Hi freesurfer team,

I got the same error described here: http://www.mail-archive.com/freesurfer@nmr.mgh.harvard.edu/msg45983.html and, as suggested, I tried to copy in $FREESURFER_HOME/bin/ the patch from ftp://surfer.nmr.mgh.harvard.edu/transfer/outgoing/flat/greve/mri_segstats but I cannot find the URL. I also found some patches here : https://surfer.nmr.mgh.harvard.edu/pub/dist/freesurfer/5.3.0-patch/ but I don't know which one I'm supposed to use.

Any advice?

Thanks! Gloria

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