[pang@localhost ~]$ source $FREESURFER_HOME/SetUpFreeSurfer.sh -------- freesurfer-Linux-rh9-stable-pub-v4.0.2 -------- Setting up environment for FreeSurfer/FS-FAST (and FSL) FREESURFER_HOME /usr/local/freesurfer FSFAST_HOME /usr/local/freesurfer/fsfast FSF_OUTPUT_FORMAT nii SUBJECTS_DIR /usr/local/freesurfer/subjects MNI_DIR /usr/local/freesurfer/mni FSL_DIR /usr/local/freesurfer/fsl [pang@localhost ~]$ source FREESURFER_HOME/bin/tcl_setup bash: FREESURFER_HOME/bin/tcl_setup: No such file or directory [pang@localhost ~]$ source $FREESURFER_HOME/bin/vtk_setup bash: /usr/local/freesurfer/bin/vtk_setup: line 80: syntax error: unexpected end of file [pang@localhost ~]$ source $FREESURFER_HOME/bin/kww_setup bash: /usr/local/freesurfer/bin/kww_setup: line 62: syntax error: unexpected end of file [pang@localhost ~]$ ldd $FREESURFER_HOME/bin/qdec.bin linux-gate.so.1 => (0xffffe000) libtix8.1.8.4.so => not found libtk8.4.so => /usr/lib/libtk8.4.so (0xf7ef2000) libtcl8.4.so => /usr/lib/libtcl8.4.so (0xf7e31000) libGLU.so.1 => /usr/lib/libGLU.so.1 (0xf7dc2000) libGL.so.1 => /usr/lib/libGL.so.1 (0xf7d1e000) libX11.so.6 => /usr/lib/libX11.so.6 (0x0050f000) libXmu.so.6 => /usr/lib/libXmu.so.6 (0xf7d06000) libverdict.so.1.2 => not found libvtkGraphics.so.5.1 => not found libvtkfreetype.so.5.1 => not found libvtkmetaio.so.5.1 => not found libvtkpng.so.5.1 => not found libvtkzlib.so.5.1 => not found libvtkImaging.so.5.1 => not found libvtkFiltering.so.5.1 => not found libvtkCommon.so.5.1 => not found libvtksys.so.5.1 => not found libvtkexoIIc.so.5.1 => not found libvtkNetCDF.so.5.1 => not found libvtkVolumeRendering.so.5.1 => not found libvtkRendering.so.5.1 => not found libvtkftgl.so.5.1 => not found libvtkWidgets.so.5.1 => not found libvtkHybrid.so.5.1 => not found libvtkIO.so.5.1 => not found libvtkDICOMParser.so.5.1 => not found libvtkVolumeRenderingTCL.so.5.1 => not found libvtkRenderingTCL.so.5.1 => not found libvtkFilteringTCL.so.5.1 => not found libvtkWidgetsTCL.so.5.1 => not found libvtkHybridTCL.so.5.1 => not found libvtkGraphicsTCL.so.5.1 => not found libvtkImagingTCL.so.5.1 => not found libvtkIOTCL.so.5.1 => not found libvtkCommonTCL.so.5.1 => not found libKWWidgets.so => not found libz.so.1 => /lib/libz.so.1 (0x001fd000) libcrypt.so.1 => /lib/libcrypt.so.1 (0x00bcd000) libdl.so.2 => /lib/libdl.so.2 (0x00bb7000) libpthread.so.0 => /lib/libpthread.so.0 (0xf7ce7000) libstdc++.so.5 => /usr/lib/libstdc++.so.5 (0xf7c2e000) libm.so.6 => /lib/libm.so.6 (0xf7c04000) libgcc_s.so.1 => /lib/libgcc_s.so.1 (0x00df2000) libc.so.6 => /lib/libc.so.6 (0x00a5c000) libstdc++.so.6 => /usr/lib/libstdc++.so.6 (0x008e9000) libGLcore.so.1 => /usr/lib/libGLcore.so.1 (0xf70ee000) libnvidia-tls.so.1 => /usr/lib/tls/libnvidia-tls.so.1 (0xf70eb000) libXext.so.6 => /usr/lib/libXext.so.6 (0x0089a000) libxcb-xlib.so.0 => /usr/lib/libxcb-xlib.so.0 (0x0050b000) libxcb.so.1 => /usr/lib/libxcb.so.1 (0x0060d000) libXt.so.6 => /usr/lib/libXt.so.6 (0x00632000) /lib/ld-linux.so.2 (0x00a3d000) libXau.so.6 => /usr/lib/libXau.so.6 (0x00d4c000) libXdmcp.so.6 => /usr/lib/libXdmcp.so.6 (0x00d6f000) libSM.so.6 => /usr/lib/libSM.so.6 (0xf70e1000) libICE.so.6 => /usr/lib/libICE.so.6 (0xf70c7000)