Re: [Freesurfer] How to visualize the result with mri_glmfit and --table aparc flag

beta = MRIread('beta.mgh');

beta.vol will have the pixel data

On 05/19/2017 11:04 PM, Duy Nguyen wrote:

Thank you for you quick response Doug

Please instruct me how I can read out the output file beta.mgh to get the values from the mri_glmfit output on FreeSurfer. Thank you for your help and warmest regards,

Duy Nguyen

*--v-- Peace --v--* *Duy Nguyễn * *Biomedical Engineering Department- IU HCMC* *Cell: (+84)909999056* *Email: duy.nguyenbme@gmail.com mailto:duy.nguyenbme@gmail.com*

On Sat, May 13, 2017 at 11:41 PM, Douglas Greve <greve@nmr.mgh.harvard.edu mailto:greve@nmr.mgh.harvard.edu> wrote:

run mri_glmfit --help for more info


On 5/13/17 2:28 AM, Duy Nguyen wrote:

...

Dear FreeSurfer Experts

One more question I would like to add is how to interpret the
output data after running mri_glmfit like beta.mgh, rstd.mgh on
Matlab.

Thanks so much for your help
Regards,


*--v-- Peace --v--*
*Duy Nguyễn *
*Biomedical Engineering Department- IU HCMC*
*Cell: (+84)909999056*
*Email: duy.nguyenbme@gmail.com <mailto:duy.nguyenbme@gmail.com>*

On Sat, May 13, 2017 at 12:00 AM, Duy Nguyen
<duy.nguyenbme@gmail.com <mailto:duy.nguyenbme@gmail.com>> wrote:

    Dear FreeSurfer experts

    I have come across with this issue as I don't know how
    visualize the result after mri_glmfit done using --table
    aparc flag instead of --y.  Do I use Matlab to do it? Please
    give me the instructions briefly as I've just started doing this?

    Any help is appreciated!
    Warmest regards,
    *--v-- Peace --v--*
    *Duy Nguyễn *
    *Biomedical Engineering Department- IU HCMC*
    *Cell: (+84)909999056*
    *Email: duy.nguyenbme@gmail.com <mailto:duy.nguyenbme@gmail.com>*




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