22 Aug
2018
22 Aug
'18
5:35 a.m.
External Email - Use Caution
Hello,
I have been using bbregister in this format
bbregister —mov dkti4d.nii —s NewT2out —init-fsl —bold —lea register.lta
NewT2out is the output of the free surfer processing on the T1 image and dkti4d.nii is the template file I want to use for the registration.
it has worked before but now there is a new error
ERROR: cannot find NewT2out in /project/iconic/apps/freesurfer/5.3.0/install/subjects
even though I have already ran the command:
setenv SUBJECTS_DIRECTORY /project/bil/Nada
This path is where both NewT2out and dkti4d.nii are located.
I don’t understand what is going wrong
Best Nada