9 Jan
2025
9 Jan
'25
5:51 a.m.
External Email - Use Caution
Dear Freesurfer experts,
is there a recent recommendation on how to get the thalamic nuclei segmentation into MNI space? I have tried the AAL3 atlas recommended in this previous mail (https://secure-web.cisco.com/1H8Dmv_kif-oWVc1HwepCKJBjRkpbig-MqiMJUrqPMzzu8x...) but it contains only 15 instead of 26 nuclei per hemisphere.
I have run recon-all and the ThalamicNuclei pipeline on the MNI-152 subject, which looks decent but wanted to make sure there is no better way?
Thank you!
Best,
Melissa Thalhammer