Re: [Freesurfer] re white matter mask

Hi Catherine

you need to put extensions on the image files you post so that we know what format they are in.

cheers Bruce

On Fri, 16 Nov 2012, Catherine Bois wrote:

Hi,

I have a question re the screenshot attached in the present email... Several slices of the white matter mask of this scan seem to have several " holes" ie black spots like this. These parts are included in the brain mask,  but the brain mask seems to be quite non-uniform in terms of "whiteness" of the brain mask. I have gone in and filled some in manually; ie done white matter edits, is this the correct way to fix this problem, or do the holes indicate some other problem?

Thank you very much for your help,

Regards Cathy