Hi, I ran into an odd problem which I was able to fix but wanted to let others know about. This is OS X 10.11.4 with Matlab 2016a and FreeSurfer 5.3.
I got the following error when I ran mkcontrast using batch files that previously worked fine:
/private/var/folders/wt/vj5q34fs20x50sh_6rcrtkn80000gn/T/Cleanup At Startup/sh.h4SI0w: No such file or directory. ERROR running mkcontrast
Looking into the directories in question, I found that while there was no directory named 'Cleanup At Startup’ inside the T directory, there was such a directory inside ‘vj5q34fs20x50sh_6rcrtkn80000gn’. I’m guessing some version update changed the location of this directory. I went into T and performed the following command:
mkdir 'Cleanup At Startup'
after doing so, everything worked again.
Cheers!
Joe
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Joseph Dien, PhD Senior Research Scientist Maryland Neuroimaging Center University of Maryland, College Park E-mail: jdien07@mac.com Cell Phone: 202-297-8117 http://joedien.com