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Hi all,
I ran a 2yo subject through FS6.0 using 'recon-all -i /firstdicom.dcm -all' and the output segmentations and surfaces looks good.
Can someone explain why I see different alignments when I view the 001.mgz and brainmask.mgz files in freeview, depending on the order files are opened.
001.mgz AND brainmask.mgz -- 001 opened first in freeview followed by brainmask.mgz. Alignemnts OK but brainmask looks grainy. [cid:image001.jpg@01D56C83.BD016B00] [cid:image002.jpg@01D56C83.BD016B00]
Brainmask.mgz opened only in a new terminal. Rotated and looks smoother than brainmask above. [cid:image003.jpg@01D56C83.BD016B00]
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