Is this a consistent problem with specific subjects? Are you always loading the tkmeditColorsCMA file? Do other tables work (it's okay if the colors don't look right, just try it to see if it causes the same problem)?
On Tue, Sep 05, 2006 at 07:12:35PM +0100, Johannes Klein wrote:
Hi everyone, I have a rather obscure problem. There are some subjects whose aseg subcortical parcellations will not load up in tkmedit, causing it to crash. This happens when using a Mac with X11 to view them, not on my Linux machine. Interestingly though, this does not happen for all subjects, some do get displayed correctly on the Mac, too. Here's what I do: tkmedit mysubj T1.mgz Then, use tkmedit's File-Load Segmentation There, select aseg.mgz and tkmeditColorsCMA
tkmedit then crashes, producing the following log: tkmedit started: Tue Sep 5 17:26:20 2006
tkmedit PAT_XXXX T1.mgz lh.white -aux-surface rh.white
$Id: tkmedit.c,v 1.274.2.1 2006/03/06 19:52:48 kteich Exp $ $Name: stable3 $ Set user home dir to /Volumes/JalapenoSAN/Scratch/XXXXXX/fs Set subject home dir to /Scratch/XXXXXX/fs/PAT_XXXX Using interface file /usr/local/freesurfer/lib/tcl/tkmedit.tcl Tcl: Successfully parsed tkmedit.tcl Tcl: Successfully parsed tkm_functional.tcl Error 1 in CLUT_GetLabel: Invalid pointer to object.
I wonder if this is a known problem for Macs? Thanks, Johannes _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer