20 Apr
2012
20 Apr
'12
3:52 p.m.
Hi Josh
if you specify a new directory that will certainly work. We try very hard to preserve any manual interventions you have taken so that is why -all doesn't start fresh - we don't want it to.
cheers Bruce
On Fri, 20 Apr 2012, Joshua Lee wrote:
If I were to want to re-run a recon-all completely fresh on a subject, what do I need to do aside from creating a new subject directory?
I had previously thought that by adding the -all flag, all old files would be over written (i.e. overwrite with a new brainmask.mgz). I want everything fresh. Does the -clean flag do it all? Thanks Josh