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HCPMMP1 parcellation is multi modal parcellation We need the file something like we have for 'aparc' parcellation. The file format should be in .mgz (aparc.HCPMMP1+aseg.mgz) How can i do it? (i have lh.HCPMMP1.annot and rh.HCPMMP1.annot)
Date: Thu, May 7, 2020 at 2:16 PM Subject: HCPMMP1 parcellation to aseg (.mgz) To: freesurfer@nmr.mgh.harvard.edu
Hai list,
Can I get some insight on how to convert HCPMMP1 to aseg(provided we have annotation
files) for fsaverage brain?
For example: for aparc parcellation we use aparc2aseg and get
aparc+aseg.mgz.
Similarly I need for HCPMMP1. Can someone help me with this? Thank you
From: "Glasser, Matthew" glasserm@wustl.edu Subject: Re: [Freesurfer] HCPMMP1 parcellation to aseg (.mgz) To: Freesurfer support list freesurfer@nmr.mgh.harvard.edu Cc: Timothy Coalson tsc5yc@mst.edu Message-ID: 29142489-F691-4E6E-A069-F7377D9C7A63@wustl.edu Content-Type: text/plain; charset="utf-8"
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That is our multi-modal parcellation. Tim has some instructions to get data from the fs_LR mesh to fsaverage in GIFTI format. Doug perhaps you can say how to convert from GIFTI to annot?
Matt.