usually that means a symbolic link is recursive or self-referential in some way. What does
ls -l /Applications/freesurfer/subjects/fsaverage
return?
Bruce On Fri, 27 Jan 2012, cloud.ctrl@me.com wrote:
I have subjects exiting with errors and I'm not sure why. The best clue I have is a line indicating "Too many levels of symbolic links" and an inability to read lh.BA1.label. Here are the last few lines of output:
SUBJECTS_DIR /Applications/freesurfer/subjects FREESURFER_HOME /Applications/freesurfer Loading source label. Too many levels of symbolic links ERROR reading /Applications/freesurfer/subjects/fsaverage/label/lh.BA1.label Darwin stat-240-26.sdsu.edu 9.8.0 Darwin Kernel Version 9.8.0: Wed Jul 15 16:55:01 PDT 2009; root:xnu-1228.15.4~1/RELEASE_I386 i386
recon-all -s GB exited with ERRORS at Thu Jan 26 00:29:32 PST 2012
Can anyone tell me what is happening here? _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer