I guess it should be dicom, I need to ask our colleagues who acquire the data. Are there any other requirements for input images if they are dicom? Thanks a lot!
2014-10-02 9:18 GMT-04:00 Bruce Fischl fischl@nmr.mgh.harvard.edu:
almost certainly yes. I assume they are dicom?
On Thu, 2 Oct 2014, Svetlana Soloveva wrote:
I see, thank you! In this case do you support the original MRIs if I can
get them? It is my first time working with Freesurfer, so your input is very helpful.
2014-10-02 9:00 GMT-04:00 Bruce Fischl fischl@nmr.mgh.harvard.edu: I see. Sorry, I don't think we support it then
Bruce On Thu, 2 Oct 2014, Svetlana Soloveva wrote: Hi Bruce, Thnaks! I think it is CTF MEG MRI file created by MRIConverter. 2014-10-02 8:35 GMT-04:00 Bruce Fischl <fischl@nmr.mgh.harvard.edu>: Hi Svetlana what format is *.mri? I don't think I've ever heard of it Bruce On Thu, 2 Oct 2014, Svetlana Soloveva wrote: Dear all, If I understand correctly, it is recommended to use original MRI files as an input. However, I have only *.mri file. First, I was able to run reconstruction following fieldtrip pipeline which includes some preprocessing of *.mri and writing resulting files in *.mgz format that can be used by Freesurfer. Is there any other way to work with *.mri files in Freesurfer without these preprocessing steps? Many thanks! Svetlana _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Partners Compliance HelpLine at http://www.partners.org/complianceline . If the e-mail was sent to you in error but does not contain patient information, please contact the sender and properly dispose of the e-mail.
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