Hello,
I know that we can resume a recon-all command, if it's a cross-sectionnally process. In this case the command is:
recon-all -make all -s subject
But I had a power failure during a longitudinal study, when I try to execute : recon-all -sd . -base 'Test_base_22' -tp 'OAS2_0001_MR1' -tp 'OAS2_0001_MR2'
That's why I would like to resume this command, that's why I tried : recon-all -make all -sd . -s 'Test_base_22'
But I received this error :
ERROR: It appears that this subject ID is an existing base/template from longitudinal processing (-base). Please make sure you pass all necessary flags. For example, if you are trying to re-run a -base:
' -base <templateid> -tp <tpNid> ... '
So I tried this command:
recon-all -make all -sd . -base 'Test_base_22' -tp 'OAS2_0001_MR1' -tp 'OAS2_0001_MR2'
But I received the same error:
Subject Stamp: freesurfer-Darwin-leopard-i686-stable-pub-v5.1.0 Current Stamp: freesurfer-Darwin-leopard-i686-stable-pub-v5.1.0 Subject 'Test_base_22': make all recon-all -s /Users/****/tool_test/FreeSurfer/longi/restart/Test_base_22 -talairach -tal-check
ERROR: It appears that this subject ID is an existing base/template from longitudinal processing (-base). Please make sure you pass all necessary flags. For example, if you are trying to re-run a -base:
' -base <templateid> -tp <tpNid> ... ' make: *** [/Users/****/tool_test/FreeSurfer/longi/restart/Test_base_22/mri/transforms/talairach.auto.xfm] Error 1
Somebody can help me and tell me which command I need to execute.
Natacha