You will be much better off if you can convert properly from DICOM. If that is not possible, you can use --left-right-reverse with mri_convert to change the header (put not pixel data) or --left-right-reverse-pix to change the pixel data (but not head). doug
On 06/06/2013 12:27 PM, Ray, Siddharth wrote:
Hi free-surfer folks,
I have some subjects with L-R header flipped in nifti’s. Is it possible to flip the header using mri_convert so that I can have the right orientation information for subjects.
Please let me know.
Thanks,
-Siddharth
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