Hi Allison - You can use bblabel for the cuts. (You'd have to map the label to fsaverage first, use bblabel, and then map back to the individual.)
Hope this helps, a.y
On Fri, 3 Jun 2011, Allison R. Kaup wrote:
Hello!
I am attempting to create a DLPFC ROI, based on methods described in : Yendiki et al. (2010). Multi-site characterization of an fMRI working memory paradigm: Reliability ofactivation indices. Neuroimage. 53 (1), 119-131.
Those authors state they merged existing parcellation labels, and then made a "coronal cut at Talairach coordinate y=26." I have successfully merged the existing labels, but am having trouble figuring out a good way to do the cut. I have tried using the "Make closed path" and "Custom fill" options in tksurfer, but am having trouble getting those to make a clean cut right at y=26.
I'd appreciate any suggestions!
Thank you, Allison _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer