Hi Bruce,
Does FS6 support the 'openmp 8' flag? I tried to use this flag with 'recon-all -all' on FS6, but it took longer time for only one subject.
Thank you, Aziz.
On Fri, Feb 3, 2017 at 10:16 PM, Bruce Fischl fischl@nmr.mgh.harvard.edu wrote:
Hi Aziz
with multiple course you can specify -openmp 8 for exmaple to use 8 cores, which speeds things up a lot. It also depends how many recons you will be running at the same time. A 16 core machine with 64G of ram would be able to run 4 recons in a few hours each.
cheers Bruce
On Fri, 3 Feb 2017, Aziz Nanthaamornphong wrote:
Hi experts,
I would like to find a new high-performance computer to run the reconstruction process in Freesurfer. Currently, I used a single computer (Intel core i7, RAM 8MB) to run the commands (e.g., 'recon-all -all' ) that spent average time 7-9 hours per one subject data.
Please let me know what the best spec of the computer that can reduce the time to 2-3 hours (if possible).
Thank you, Aziz
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