Hey Hao, What software did you use to do your analysis? Also, if you are ok with it, can you please post your scripts on how you did it. I want to implement it in my analysis. Thank you very much. Paul
On Mon, Jan 2, 2017 at 7:52 AM, Hao wen hao.freesurfer@hotmail.com wrote:
Hello:
I have a question, after recon-all, I did some group analysis with the aseg.stats( not surface-based), so my question is :
Does freesurfer has some volume-based group analysis(not for fMRI) for plotting the significance map, I searched google, and wanna some results like this:
I know here is for fMRI-sMRI based analysis:
So i want to map some values for the subcortical structures in the anatomical image, but for the command here, how can I get the sig.nii(right now, we just have the result p-value for every subcortical structures), I know in FS, we can use mri_glmfit to have the significance map
Any advice will be appreciated
Hao
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