Re: [Freesurfer] colortable

Satrajit Ghosh wrote:

1. Is there a matlab function to read the colortable from an annot file?

Not that I know of.

2. Is there a reason why several of the annotvalues generated by the

classifier using rh.atlas2005_simple.gcs do not have corresponding names in surface_labels.txt? I remember there was a release where there was a separate colortable for that atlas, but it doesn't exist in the current download, so I was assuming they have been merged into a single file.

I'm not sure why there is a difference. The colortable associated with an annot can be found in the stats dir (eg, stats/aparc.annot.a2005s.ctab

doug

Thanks,

Satra

---

Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer