Hi,
Looking at the data you have sent us, the surfaces look okay. No edits are needed. That bubble in the ventricle in Coronal view is labeled as Choroid plexus. Future freesurfer versions will fill the choroid as well.
Sita.
On Mon, 9 Feb 2009, karlkarl wrote:
Hello, I sending in two more sagigital views. You mentioned it was related to the aseg. In the tutorial exmaples of defects, it always uses brainmask as a guide to fix the problem in wm.mgz, which wouldn't work in this case. Would you give some intrctions on corrction from aseg.
thanks
Date: Thu, 5 Feb 2009 16:48:48 -0500 From: fischl@nmr.mgh.harvard.edu To: rememberer@hotmail.com Subject: RE: [Freesurfer] white matter defect CC: freesurfer@nmr.mgh.harvard.edu
I see. The ventricles are filled in from the aseg, but if you filled in the wm.mgz that would work as well. It may not be needed though. What does it look like in a saggital view?
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