I mean to check the norm.mgz in the base.
On 29.10.2010, at 09:44, Guang Zeng freesurfer_zg@hotmail.com wrote:
Hello, Martin,
I checked the norm.mgz of these two time points, nothing is wrong. Maybe I can try the new version of mri_robust_register and ...template,
I checked the mailing list. Actually, someone met the same kind of problem in 2009 and 2008. But it looks like this problem was unsolved.
Thanks! Guang
From: mreuter@nmr.mgh.harvard.edu Date: Thu, 28 Oct 2010 21:29:55 -0400 To: freesurfer_zg@hotmail.com CC: freesurfer@nmr.mgh.harvard.edu Subject: Re: [Freesurfer] longitudinal base error
Haven't seen this before. Can you send the lta file (should be in basid/MRI/transforms) Probably the lta is not correct. Also you can try to delete the base dir and rerun, maybe it was just a hiccup.
Does the norm.mgz look good in the base? If not registration did not work. In that case download updated mri_robust_register and ...template (links on the wiki on the 5.0 release notes) and run again.
Best Martin
On 28.10.2010, at 20:24, Guang Zeng freesurfer_zg@hotmail.com wrote:
Hi, there,
%% After running this command with FS v4.5 : recon-all -base 005_S_0221BASE -tp 005_S_0221_45_20070321.105506_1 -tp 005_S_0221v2_45_20061006.104318_1 -all -force
%% I get the following error:
mri_concatenate_lta -invert1 005_S_0221_45_20070321.105506_1_to_005_S_0221BASE.lta identity.nofile 005_S_0221BASE_to_005_S_0221_45_20070321.105506_1.lta
invert the first LTA before applying it MatrixInverse: NULL input matrix!
Read individual LTAs %%%%%%%%%%
Any one can help me?
Thanks a lot! uang _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
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