Dear freesurfer experts,
I am trying to so the brainstem segmentation with freesurfer version *freesurfer-Darwin-OSX-stable-v6-beta-20161116-5037eae. *I incorporated the MCR in the fs dev directory. When I run the command recon-all -s foo -brainstem-structures. I am getting the following error: MATLAB is exiting because of fatal error: /usr/local/freesurfer/bin/run_SegmentSubject.sh: line 38: 10488 Killed: 9 "${exe_dir}"/segmentSubject.app/Contents/MacOS/segmentSubject $args.
Will you please let me know I do I fix this? My subjects were processed with: freesurfer-Linux-centos6_x86_64-dev-20160211. Presently I am working with freesurfer-Darwin-OSX-stable-v6-beta-20161116-5037eae.
I am incorporating the matlab crash dump file with mail. Your help will be greatly appreciated.