Daniel, Stefano, Others,
A patch is now available for the "mris_resample : Command not found" error you encountered.
Simply download the file from the following link and place it in your $FREESURFER_HOME/bin directory:
ftp://surfer.nmr.mgh.harvard.edu/pub/dist/freesurfer/patches/mris_resample
Feel free to contact me if you have any additional questions/issues.
-Zeke
-------- Original Message -------- Subject: Re: [Freesurfer] mris_resample: Command not found. Date: Tue, 28 May 2013 11:41:21 -0400 From: Z K zkaufman@nmr.mgh.harvard.edu To: Barron, Daniel S barrond@livemail.uthscsa.edu CC: freesurfer@nmr.mgh.harvard.edu freesurfer@nmr.mgh.harvard.edu, Lilla Zollei lzollei@nmr.mgh.harvard.edu
Hello Daniel,
This is a confirmed issue with the 64bit Mac build. A patch to fix the issue will be available shortly (~hours). I will email the list and you personally once it is available. Sorry for the inconvenience.
-Zeke
On 05/28/2013 11:36 AM, Barron, Daniel S wrote:
Hi Lilla, I'm using OSX 10.8.3 Thanks, Daniel ________________________________________ From: Lilla Zollei [lzollei@nmr.mgh.harvard.edu] Sent: Tuesday, May 28, 2013 10:04 AM To: Barron, Daniel S Cc: freesurfer@nmr.mgh.harvard.edu Subject: Re: mris_resample: Command not found. Hi Daniel, What operating system are you using? Lilla On Tue, 28 May 2013, Barron, Daniel S wrote:
Hello, I am trying to perform an inter-subject registration using
mri_cvs_register on version 5.3.
When I ran mri_cvs_check, my feedback was I needed to find
"mri_cvs_register.settings.txt" but I didn't worry about this per Lilla's post: https://mail.nmr.mgh.harvard.edu/pipermail//freesurfer/2012-April/023445.htm...
mri_cvs_register kicks off well, but eventually it ends with: "mris_resample: Command not found." I go into my $FREESURFER_HOME/bin directory and note that mris_resample
is truly not there. Did I not install 5.3 properly?
I have attached a log file in case this helps. Cheers, Daniel
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