Hi Ankita
sure, we compute GI. You need to get a good T1-weighted scan with voxels that are about 1mm isotropic, then run it through our recon-all script
cheers Bruce On Mon, 18 Jan 2016, Arindam Chatterjee wrote:
Hello,I am a new user of the freesurfer platform. I am a high school junior conducting research on brain MRI scans and came across this wonderful platform. However I am not very sure how to proceed with my research - I am trying to find the whole brain Gyrification Index, which I did manually on a different software called ImageJ using multiple image scans of brain slices. Will freesurfer be able to analyze brain scan images and provide a whole brain GI or does it only analyse and provide local GI which is what I found through some forums? If so, are there any tutorials to learn how to do that? Do I need any other software like MatLab to find out the Gyrification Index?
Thank you in advance! Ankita