Download and try this program https://gate.nmr.mgh.harvard.edu/safelinks/greve/gtmstats2table I wrote it 3 years ago but somehow it did not make it into the distribution. I'm not sure it works, so let me know how it goes
On 8/10/2020 1:09 PM, Gary Tan wrote:
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Hi freesurfer mailing-list,
I am trying to use asegstats2table to combine the individual gtm.stats.dat files. I assume that the output is mixed up because these gtm files have no column labels. Below is the command I used:
asegstats2table --inputs subject1/gtmpvc.output/gtm.stats.dat subject2/gtmpvc.output/gtm.stats.dat --meas mean --all-segs --tablefile test_stats_pvc.txt
Is there a way to tweak the asegstats2table command to get the gtm.stats.dat files from different subjects stacked into a single file?
Freesurfer 6.0 is the version
Platform is Ubuntu 16.04
Sincerely,
Gary Tan
Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer