Hi HweeLing,
I think the aparc.a2005s has the STS labeled in it, so you should already have what you need in individual space. You could use mri_annot2label, mri_label2vol and mri_vol2vol to transform this into MNI if you need to.
cheers, Bruce
On Fri, 12 Sep 2008, Hwee Ling Lee wrote:
Hi All,
I was looking for methods to create a superior temporal sulcus mask (upper and lower boundary).
From my understanding, Freesurfer does a pretty good job in labeling the
sulcus, hence I was wondering if there are possible ways to write the particular ROI as a mask image for each individual subject, and preferably to be in the MNI space or if not, at least in the native space.
Thank you.
Best wishes, HweeLing
Hwee Ling, Lee Max-Planck Institute for Biological Cybernetics Cognitive Neuroimaging Spemannstrasse 41 72076 Tuebingen Germany Tel: +49-70701-601-1785 Fax: +49-7071-601-616 hwee-ling.lee@tuebingen.mpg.de hweeling.lee@gmail.com http://www.kyb.mpg.de/~hweeling
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