There you go, thanks! Gari
On Wed, Oct 16, 2013 at 9:32 PM, Juan Eugenio Iglesias < iglesias@nmr.mgh.harvard.edu> wrote:
Gari, can you send us the log of the hippo subfield module (or the screen output; they should be the same) Cheers, /Eugenio
On 10/16/2013 10:22 AM, Garikoitz Lerma-Usabiaga wrote:
Hi, I had a subject already run through recon-all. After making recon-all -s ID -hippo-subfields or recon-all -s ID -hippo-subfields -make all
it is failing.
It is the first subject ever failing with the hippo-subfields. The rest of the subjects are ok. This subject is properly segmented (tkmedit ID brainmask.mgz -surfs -aseg is ok).
Any recommendations on what to do next?
thanks! Gari
PS1 please find attached the last recon-all invocation log. PS2 I have the screen output as well, there was more detail in that, in case it would help recognizing the problem.
Freesurfer mailing listFreesurfer@nmr.mgh.harvard.eduhttps://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
--
Juan Eugenio Iglesias, PhDhttp://www.jeiglesias.comiglesias@nmr.mgh.harvard.edu Athinoula A. Martinos Center for Biomedical Imaging 149 Thirteenth Street, Suite 2301 Charlestown, Massachusetts 2129 U.S.A.
The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Partners Compliance HelpLine at http://www.partners.org/complianceline . If the e-mail was sent to you in error but does not contain patient information, please contact the sender and properly dispose of the e-mail.