Sorry, we don't support that atlas. Have you tried contacting FSL?
On 9/23/2021 7:08 AM, DRON Noramon wrote:
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Dear Freesurfer Team
I have a very naive question. I am in urgent need to get a cortical region volume base on the Harvard-Oxford Cortical Atlas(from FSL). I have T1 images in nifti files, brain extracted. How can I get the cortical volume using Freesurfer, and regions based on the Harvard-Oxford Cortical Atlas? Please, I am very new to Freesurfer and in the middle of installing Freesurfer to linux server. Can you tell me the steps or a link to your tutorial page? I am trying to find it on your wiki page and have trouble navigate around.
Thank you in advance,
Best regards Noramon The University of Edinburgh is a charitable body, registered in Scotland, with registration number SC005336. Is e buidheann carthannais a th’ ann an Oilthigh Dhùn Èideann, clàraichte an Alba, àireamh clàraidh SC005336.
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