what version are you using? I think this won't happen in V6,but if you upload the subject dir I can check for you. To fix it check and correct the wm.mgz and the aseg.mgz in that region
cheers Bruce On Thu, 29 Oct 2015, Thục Trinh wrote:
Hi Freesurfer experts, I ran recon-all for our subjects and there is a problem with the wrong segmentation between the white/gray matter. this error appears in couples continued slices. Picture are attached. Do you have any suggestion to fix this error.
Thank you, Trinh