No, you should be seeing 5 regressors. Can you send me the analysis.info file and the X.mat file from the output directory? doug
On 05/02/2012 05:50 PM, Caspar M. Schwiedrzik wrote:
Hi, I am trying to use mkanalysis-sess in version 5.1 with 5 external regressors. I have prepared them as individual text files.
When I run mkanalysis-sess -force -notask -a lot of other stuff -taskreg seed1 1 -taskreg seed2 1 -taskreg seed3 1 -taskreg seed4 1 -taskreg seed5 1 -nuisreg global.waveform.dat 1 -mcextreg
followed by slxavg3-sess, I only get contrasts for seeds 1-4. Seed 5 is apparently not in the design matrix. Is there a limit to the number of external regressors? I guess I could circumvent this by having one text file with all five regressors, correct? Thanks, Caspar
Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer