Hi Muhammad
try:
set sdir=/home/naveed/freesurfer/subjects/CHR01/surf mris_convert -c $sdir/rh.thickness $sdir/rh.orig $sdir/rh.thickness.brik
cheers Bruce
On Mon, 6 Jan 2014, Muhammad Naveed Iqbal Qureshi wrote:
Hi, I want to know that how can I convert FreeSurfer .thickness files to AFNI readable format I tried the following Command but it gives error
mri_convert /home/naveed/freesurfer/subjects/CHR01/surf/rh.thickness /media/Freesurfer_Data/Processed/AFNI_format/CHR/CHR01/rh.brik $Id: mri_convert.c,v 1.179.2.7 2012/09/05 21:55:16 mreuter Exp $ reading from /home/naveed/freesurfer/subjects/CHR01/surf/rh.thickness... TR=0.00, TE=0.00, TI=0.00, flip angle=0.00 i_ras = (-1, 0, 0) j_ras = (0, 0, -1) k_ras = (0, 1, 0) writing to /media/Freesurfer_Data/Processed/AFNI_format/CHR/CHR01/rh.brik... AFNI BRIK write unsupported ERROR: failure writing /media/Freesurfer_Data/Processed/AFNI_format/CHR/CHR01/rh.brik UN:/media>
Please let me help me to solve this problem Thank you :)
Best Regards, Muhammad Naveed Iqbal Qureshi