Hello,
Anyone have a chance to look at this? Should we just forget about trying to get an accurate lhCorticalWhiteMatterVol value for this subject?
thanks, -MH
On Tue, 2012-02-21 at 15:35 -0600, Michael Harms wrote:
Hi guys,
We have a subject processed with FS v5.1 in which lhCorticalWhiteMatterVol in aseg.stats is much too low -- only 33781 mm^3. From what I see, the aseg.mgz looks fine. 'mris_volume lh.white' returns 287261 and running mri_segstats without the --excl-ctxgmwm option returns a Left-Cerebral-White-Matter volume of 245169. 'mris_euler_number' indicates no problems with lh.white.
Running 'mris_wm_volume' on its own generates the same value of 33781. I also tried running 'mris_wm_volume' with the -v option to see if any interesting messages popped up, but got the message "unknown option -v".
Any idea what is going wrong here? So you can see for yourself, I went ahead and uploaded the subject's processed data to your FTP server (110107_L206.tgz)
thanks, -MH