Hi!

Thanks for the replies!

1. I think, I need some help with the stats output of mris_calc: e. g. mris_calc lh.area stats gives me

mris_calc lh.area stats mris_calc: Insufficient number of arguments. You should specify '<curvFile1> <ACTION> <curvFile2>' Use a '-u' for full usage instructions.

which is a quite humiliating error message, isn't it ...

2. A look into the /surf/ directory shows that lh.area.mid has a size of zero byte. That does not look very sensible.

3. Disk-Space: I am running my experiments on a NAS with >300 MB free diskspace. Even my local computer has some GB's left and I don't see anything written locally. Memory and processor speed should be enough (4 MB quad-core).

2009/6/23 Grimm, Oliver Oliver.Grimm@zi-mannheim.de

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*Von:* freesurfer-bounces@nmr.mgh.harvard.edu im Auftrag von Nick Schmansky[SMTP:NICKS@NMR.MGH.HARVARD.EDUSMTP%3ANICKS@NMR.MGH.HARVARD.EDU]

*Gesendet:* Dienstag, 23. Juni 2009 01:04:35 *An:* Grimm, Oliver *Cc:* Freesurfer Mailing List *Betreff:* Re: [Freesurfer] concerning my posting: curvature file'lh.area.mid' has wrong magic number - add logfile *Diese Nachricht wurde automatisch von einer Regel weitergeleitet.*

Oliver,

That's a strange error. Did you run out of disk space? I can only think of that as a reason for a corrupted curvature file.

Nick

On Mon, 2009-06-22 at 14:00 +0200, Oliver Grimm wrote:

...

Hi!

I just mentiones my error

curvature file 'lh.area.mid' has wrong magic number

on a openSUSE 11.1 system:

/data/MOODS2/freesurfer/1005/surf

mris_calc -o lh.area.mid lh.area add lh.area.pial

mris_calc -o lh.area.mid lh.area.mid div 2

mris_calc -o lh.volume lh.area.mid mul lh.thickness

mris_calc: curvature file 'lh.area.mid' has wrong magic number.

Linux impsy-pc4 2.6.27.19-3.2-default #1 SMP 2009-02-25 15:40:44 +0100 x86_64 x8 6_64 x86_64 GNU/Linux

recon-all exited with ERRORS at Sat Jun 20 00:17:58 CEST 2009

I forgot to attach the recon-all.log for further details. I attached it.

Thank you for your held,

Oliver Grimm

-- Dr. med. Oliver Grimm Zentralinstitut für Seelische Gesundheit Institut für Neuropsychologie und Klinische Psychologie & AG Imaging in der Psychiatrie J5 68159 Mannheim

Tel: +49-621-1703-6341 Fax: +49-621-1703-6305 email oliver.grimm@zi-mannheim.de _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer

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