I am new to FreeSurfer and am attempting to segment T1 images using the "recon-all...autorecon2" command. The segmentation results look quite accurate, but I was wondering how to best edit the results (where there is a need). I noticed on the Wiki a possible option using the TkMedit program. I have tried running the command "tkmedit subjid wm.mgz -aux T1.mgz" as directed, but it gives me an error. Could someone direct me to the correct tutorial or answer my question directly. Thanks.
Jared
what is the error? On Wed, 16 May 2007, Jared Conley wrote:
I am new to FreeSurfer and am attempting to segment T1 images using the "recon-all...autorecon2" command. The segmentation results look quite accurate, but I was wondering how to best edit the results (where there is a need). I noticed on the Wiki a possible option using the TkMedit program. I have tried running the command "tkmedit subjid wm.mgz -aux T1.mgz" as directed, but it gives me an error. Could someone direct me to the correct tutorial or answer my question directly. Thanks.
Jared _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
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Jared Conley