Bruce Fischl wrote:

could be. Is it set to the right place?

On Wed, 16 May 2007, Jared Conley wrote:

...

Bruce Fischl wrote:

...

what is the error? On Wed, 16 May 2007, Jared Conley wrote:

...

I am new to FreeSurfer and am attempting to segment T1 images using the "recon-all...autorecon2" command. The segmentation results look quite accurate, but I was wondering how to best edit the results (where there is a need). I noticed on the Wiki a possible option using the TkMedit program. I have tried running the command "tkmedit subjid wm.mgz -aux T1.mgz" as directed, but it gives me an error. Could someone direct me to the correct tutorial or answer my question directly. Thanks.

Jared _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer

X11 terminal says "Error: Loading volume ... couldn't read the anatomical volume." I am worried that perhaps it's due to my SUBJECTS_DIR environment variable not being properly set, as indicated in the Wiki. Let me know what you think.

It is working now. Thanks for the assistance.