External Email - Use Caution
dear Freesurfers, after processing hippocampal subfields i cannot get amygdala stats. Instead i get the following massage
*cannot stat volumesAmygdala.txt* Any suggestions? John
PS i run freesurfer under neurodebian system on pc with windows 10
External Email - Use Caution
Hi Jon, What exact version are you using? Is it a recent development version? Cheers, /Eugenio
-- Juan Eugenio Iglesias ERC Senior Research Fellow Centre for Medical Image Computing (CMIC) University College London http://www.jeiglesias.com http://cmictig.cs.ucl.ac.uk/
From: freesurfer-bounces@nmr.mgh.harvard.edu on behalf of John Papatriantafyllou epiktitos@gmail.com Reply-To: Freesurfer support list freesurfer@nmr.mgh.harvard.edu Date: Sunday, 30 September 2018 at 09:29 To: Freesurfer support list freesurfer@nmr.mgh.harvard.edu Subject: [Freesurfer] cannot stat volumesAmygdala.txt
External Email - Use Caution dear Freesurfers, after processing hippocampal subfields i cannot get amygdala stats. Instead i get the following massage cannot stat volumesAmygdala.txt Any suggestions? John
PS i run freesurfer under neurodebian system on pc with windows 10
External Email - Use Caution
Hi it is freesurfer-Linux-centos6_x86_64-stable-pub-v6.0.0-2beb96c John
On Sun, Sep 30, 2018 at 2:50 PM Iglesias Gonzalez, Eugenio < e.iglesias@ucl.ac.uk> wrote:
External Email - Use CautionHi Jon,
What exact version are you using? Is it a recent development version?
Cheers,
/Eugenio
--
Juan Eugenio Iglesias
ERC Senior Research Fellow
Centre for Medical Image Computing (CMIC)
University College London
*From: *freesurfer-bounces@nmr.mgh.harvard.edu on behalf of John Papatriantafyllou epiktitos@gmail.com *Reply-To: *Freesurfer support list freesurfer@nmr.mgh.harvard.edu *Date: *Sunday, 30 September 2018 at 09:29 *To: *Freesurfer support list freesurfer@nmr.mgh.harvard.edu *Subject: *[Freesurfer] cannot stat volumesAmygdala.txt
External Email - Use Caution *dear Freesurfers,
after processing hippocampal subfields i cannot get amygdala stats.
Instead i get the following massage
*cannot stat volumesAmygdala.txt*
Any suggestions?
John
PS i run freesurfer under neurodebian system on pc with windows 10
Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
External Email - Use Caution
Hi again, John, The amygdala segmentation only because available in development versions newer than FreeSurfer 6.0. Please try again with the latest dev. You don’t need to re-run recon-all; you can run the hippo+amygdala volume on subjects processed with 6.0. Cheers, /Eugenio
-- Juan Eugenio Iglesias ERC Senior Research Fellow Centre for Medical Image Computing (CMIC) University College London http://www.jeiglesias.com http://cmictig.cs.ucl.ac.uk/
From: freesurfer-bounces@nmr.mgh.harvard.edu on behalf of John Papatriantafyllou epiktitos@gmail.com Reply-To: Freesurfer support list freesurfer@nmr.mgh.harvard.edu Date: Sunday, 30 September 2018 at 22:15 To: Freesurfer support list freesurfer@nmr.mgh.harvard.edu Subject: Re: [Freesurfer] cannot stat volumesAmygdala.txt
External Email - Use Caution Hi it is freesurfer-Linux-centos6_x86_64-stable-pub-v6.0.0-2beb96c John
On Sun, Sep 30, 2018 at 2:50 PM Iglesias Gonzalez, Eugenio <e.iglesias@ucl.ac.ukmailto:e.iglesias@ucl.ac.uk> wrote:
External Email - Use Caution Hi Jon, What exact version are you using? Is it a recent development version? Cheers, /Eugenio
-- Juan Eugenio Iglesias ERC Senior Research Fellow Centre for Medical Image Computing (CMIC) University College London http://www.jeiglesias.com http://cmictig.cs.ucl.ac.uk/
From: <freesurfer-bounces@nmr.mgh.harvard.edumailto:freesurfer-bounces@nmr.mgh.harvard.edu> on behalf of John Papatriantafyllou <epiktitos@gmail.commailto:epiktitos@gmail.com> Reply-To: Freesurfer support list <freesurfer@nmr.mgh.harvard.edumailto:freesurfer@nmr.mgh.harvard.edu> Date: Sunday, 30 September 2018 at 09:29 To: Freesurfer support list <freesurfer@nmr.mgh.harvard.edumailto:freesurfer@nmr.mgh.harvard.edu> Subject: [Freesurfer] cannot stat volumesAmygdala.txt
External Email - Use Caution dear Freesurfers, after processing hippocampal subfields i cannot get amygdala stats. Instead i get the following massage cannot stat volumesAmygdala.txt Any suggestions? John
PS i run freesurfer under neurodebian system on pc with windows 10
_______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edumailto:Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
freesurfer@nmr.mgh.harvard.edu
-
Iglesias Gonzalez, Eugenio -
John Papatriantafyllou