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Hi! I use FreeSurfer 6.0 over CentOS 7. I have just notice a problem with input/entry/edit boxes in Qdec and TkSurfer. I can see box content, click inside the box and even select the content but it seems read only: I can't change it. So it is impossible to see the scatter plot from a specific vertex inputing its number. Any clue about what happened and how to fix it? Thank you for your attention.
Sorry, qdec and tksurfer are becoming (have become?) obsolete. I think you can load an fsgd file in freeview
On 1/15/2020 11:02 AM, Marcos Martins da Silva wrote:
External Email - Use Caution
Hi! I use FreeSurfer 6.0 over CentOS 7. I have just notice a problem with input/entry/edit boxes in Qdec and TkSurfer. I can see box content, click inside the box and even select the content but it seems read only: I can't change it. So it is impossible to see the scatter plot from a specific vertex inputing its number. Any clue about what happened and how to fix it? Thank you for your attention.
_______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edumailto:Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
External Email - Use Caution
Thank you, Doug! Yes, there is an option to load a fsgd file in Freeview, but when you try to use this option Freeview closes wirh error. I tried to use the y.fsgd generated by Qdec process. This file works great when you use it in TkSurfer, but not in Freeview. I just need to get the thickness measure from my subjects at a particular vertex: vtmax. I can use mri-segstats to get average thickness from clusters, but not the thickness from each subject at vtmax. And I know if the input boxes were working I could get the scatter plot from vtmax, so I guess there is a function inside both Qdec and TkSurfer to return this information.
Em qui, 16 de jan de 2020 20:36, Greve, Douglas N.,Ph.D. < DGREVE@mgh.harvard.edu> escreveu:
Sorry, qdec and tksurfer are becoming (have become?) obsolete. I think you can load an fsgd file in freeview
On 1/15/2020 11:02 AM, Marcos Martins da Silva wrote:
External Email - Use CautionHi! I use FreeSurfer 6.0 over CentOS 7. I have just notice a problem with input/entry/edit boxes in Qdec and TkSurfer. I can see box content, click inside the box and even select the content but it seems read only: I can't change it. So it is impossible to see the scatter plot from a specific vertex inputing its number. Any clue about what happened and how to fix it? Thank you for your attention.
Freesurfer mailing listFreesurfer@nmr.mgh.harvard.eduhttps://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
Which version of FS are you using? I don't have this problem in v6 or dev. What OS are you using?
On 1/17/2020 9:09 AM, Marcos Martins da Silva wrote:
External Email - Use Caution
Thank you, Doug! Yes, there is an option to load a fsgd file in Freeview, but when you try to use this option Freeview closes wirh error. I tried to use the y.fsgd generated by Qdec process. This file works great when you use it in TkSurfer, but not in Freeview. I just need to get the thickness measure from my subjects at a particular vertex: vtmax. I can use mri-segstats to get average thickness from clusters, but not the thickness from each subject at vtmax. And I know if the input boxes were working I could get the scatter plot from vtmax, so I guess there is a function inside both Qdec and TkSurfer to return this information.
Em qui, 16 de jan de 2020 20:36, Greve, Douglas N.,Ph.D. <DGREVE@mgh.harvard.edumailto:DGREVE@mgh.harvard.edu> escreveu: Sorry, qdec and tksurfer are becoming (have become?) obsolete. I think you can load an fsgd file in freeview
On 1/15/2020 11:02 AM, Marcos Martins da Silva wrote:
External Email - Use Caution
Hi! I use FreeSurfer 6.0 over CentOS 7. I have just notice a problem with input/entry/edit boxes in Qdec and TkSurfer. I can see box content, click inside the box and even select the content but it seems read only: I can't change it. So it is impossible to see the scatter plot from a specific vertex inputing its number. Any clue about what happened and how to fix it? Thank you for your attention.
_______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edumailto:Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
_______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edumailto:Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
_______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edumailto:Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
External Email - Use Caution
FreeSurfer 6 over CentOS 7. I have the same problem with 5.3 too. One more information: CentOS 7 is configured as PT-br instead of English. Could it be the reason?
Em ter, 21 de jan de 2020 12:29, Greve, Douglas N.,Ph.D. < DGREVE@mgh.harvard.edu> escreveu:
Which version of FS are you using? I don't have this problem in v6 or dev. What OS are you using?
On 1/17/2020 9:09 AM, Marcos Martins da Silva wrote:
External Email - Use CautionThank you, Doug! Yes, there is an option to load a fsgd file in Freeview, but when you try to use this option Freeview closes wirh error. I tried to use the y.fsgd generated by Qdec process. This file works great when you use it in TkSurfer, but not in Freeview. I just need to get the thickness measure from my subjects at a particular vertex: vtmax. I can use mri-segstats to get average thickness from clusters, but not the thickness from each subject at vtmax. And I know if the input boxes were working I could get the scatter plot from vtmax, so I guess there is a function inside both Qdec and TkSurfer to return this information.
Em qui, 16 de jan de 2020 20:36, Greve, Douglas N.,Ph.D. < DGREVE@mgh.harvard.edu> escreveu:
Sorry, qdec and tksurfer are becoming (have become?) obsolete. I think you can load an fsgd file in freeview
On 1/15/2020 11:02 AM, Marcos Martins da Silva wrote:
External Email - Use CautionHi! I use FreeSurfer 6.0 over CentOS 7. I have just notice a problem with input/entry/edit boxes in Qdec and TkSurfer. I can see box content, click inside the box and even select the content but it seems read only: I can't change it. So it is impossible to see the scatter plot from a specific vertex inputing its number. Any clue about what happened and how to fix it? Thank you for your attention.
Freesurfer mailing listFreesurfer@nmr.mgh.harvard.eduhttps://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
Freesurfer mailing listFreesurfer@nmr.mgh.harvard.eduhttps://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
I don't know. Can you reconfigure to English to do a test?
On 1/21/2020 12:14 PM, Marcos Martins da Silva wrote:
External Email - Use Caution
FreeSurfer 6 over CentOS 7. I have the same problem with 5.3 too. One more information: CentOS 7 is configured as PT-br instead of English. Could it be the reason?
Em ter, 21 de jan de 2020 12:29, Greve, Douglas N.,Ph.D. <DGREVE@mgh.harvard.edumailto:DGREVE@mgh.harvard.edu> escreveu: Which version of FS are you using? I don't have this problem in v6 or dev. What OS are you using?
On 1/17/2020 9:09 AM, Marcos Martins da Silva wrote:
External Email - Use Caution
Thank you, Doug! Yes, there is an option to load a fsgd file in Freeview, but when you try to use this option Freeview closes wirh error. I tried to use the y.fsgd generated by Qdec process. This file works great when you use it in TkSurfer, but not in Freeview. I just need to get the thickness measure from my subjects at a particular vertex: vtmax. I can use mri-segstats to get average thickness from clusters, but not the thickness from each subject at vtmax. And I know if the input boxes were working I could get the scatter plot from vtmax, so I guess there is a function inside both Qdec and TkSurfer to return this information.
Em qui, 16 de jan de 2020 20:36, Greve, Douglas N.,Ph.D. <DGREVE@mgh.harvard.edumailto:DGREVE@mgh.harvard.edu> escreveu: Sorry, qdec and tksurfer are becoming (have become?) obsolete. I think you can load an fsgd file in freeview
On 1/15/2020 11:02 AM, Marcos Martins da Silva wrote:
External Email - Use Caution
Hi! I use FreeSurfer 6.0 over CentOS 7. I have just notice a problem with input/entry/edit boxes in Qdec and TkSurfer. I can see box content, click inside the box and even select the content but it seems read only: I can't change it. So it is impossible to see the scatter plot from a specific vertex inputing its number. Any clue about what happened and how to fix it? Thank you for your attention.
_______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edumailto:Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
_______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edumailto:Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
_______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edumailto:Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
_______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edumailto:Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
_______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edumailto:Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
freesurfer@nmr.mgh.harvard.edu
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Greve, Douglas N.,Ph.D. -
Marcos Martins da Silva