Dear Douglas,

Thank you very much!

Sincerely, Ye

On Tue, Jul 2, 2013 at 10:36 AM, Douglas N Greve greve@nmr.mgh.harvard.eduwrote:

Hi Ye, one of the programs expects that recon-all will be run all the way through instead of in parts. You will need to download a new version of mri_segstats from

ftp://surfer.nmr.mgh.harvard.edu/transfer/outgoing/flat/greve/mri_segstats.centos6

ftp://surfer.nmr.mgh.harvard.edu/transfer/outgoing/flat/greve/mri_segstats.snowleopard

Copy the file appropriate for your architecture to $FREESURFER_HOME/bin/mri_segstats

doug

On 07/02/2013 11:31 AM, ye tian wrote:

...

Dear freesurfers,

Recon-all -s subject -autorecon2 returns the following error messages

*mri_segstats will not calculate Supratentorial due to missing ribbon.mgz file*

mghRead(Path_to_subject/mri/*ribbon.mgz, -1)*: could not open file.

Prior to autorecon2, I did recon-all -s subject -autorecon1, which completed without errors.

I found a similar problem in the archive,

https://mail.nmr.mgh.harvard.edu/pipermail//freesurfer/2013-May/030025.html

...

and I will follow the suggestion given. In the same time, does anybody know what is going wrong?

Thank you very much!

Sincerely, Ye

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-- Douglas N. Greve, Ph.D. MGH-NMR Center greve@nmr.mgh.harvard.edu Phone Number: 617-724-2358 Fax: 617-726-7422

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