Hi Ye, one of the programs expects that recon-all will be run all the way through instead of in parts. You will need to download a new version of mri_segstats from
ftp://surfer.nmr.mgh.harvard.edu/transfer/outgoing/flat/greve/mri_segstats.centos6 ftp://surfer.nmr.mgh.harvard.edu/transfer/outgoing/flat/greve/mri_segstats.snowleopard
Copy the file appropriate for your architecture to $FREESURFER_HOME/bin/mri_segstats
doug
On 07/02/2013 11:31 AM, ye tian wrote:
Dear freesurfers,
Recon-all -s subject -autorecon2 returns the following error messages
*mri_segstats will not calculate Supratentorial due to missing ribbon.mgz file*
mghRead(Path_to_subject/mri/*ribbon.mgz, -1)*: could not open file.
Prior to autorecon2, I did recon-all -s subject -autorecon1, which completed without errors.
I found a similar problem in the archive,
https://mail.nmr.mgh.harvard.edu/pipermail//freesurfer/2013-May/030025.html
and I will follow the suggestion given. In the same time, does anybody know what is going wrong?
Thank you very much!
Sincerely, Ye
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