You can use mri_vol2label. Run it with --help and make sure  to use the --surf option

On 8/27/19 8:32 AM, Nillo, Ryan Michael R wrote:

     External Email - Use Caution

Hello FreeSurfer users/developers.

I manually created a binary overlay file on the pial surface. I am interested in looking at regions outside of this overlay file, so I converted lh.cortex.label to a binary overlay file and took the difference between the two. I want to take this new file and create a label so that I can run mris_anatomical_stats on the new region. How might I do this?

Sent from my iPhone

---

Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer