External Email - Use Caution
Hi Freesufer's, I need to run a group analysis but I don't know how to do it, the error always appears (print below). There are 3 groups ( risk_group) that I would like to insert as a class (LR = level 1, HR = level 2 and MDD = level 3) and I would like to control for sex, age and total brain measure. Please, if anyone can help me understand what I'm doing wrong, I'd really appreciate it. The FSG file is attached Thank you.
no fsgd file was attached. Also, have you looked at https://surfer.nmr.mgh.harvard.edu/fswiki/FsgdExamples ?
On 9/23/2022 10:04 AM, fernanda rohrsetzer wrote:
External Email - Use Caution
Hi Freesufer's, I need to run a group analysis but I don't know how to do it, the error always appears (print below). There are 3 groups ( risk_group) that I would like to insert as a class (LR = level 1, HR = level 2 and MDD = level 3) and I would like to control for sex, age and total brain measure. Please, if anyone can help me understand what I'm doing wrong, I'd really appreciate it. The FSG file is attached Thank you.
Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
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I'm sorry!
attached the FSGD file.
Em dom., 25 de set. de 2022 às 14:10, Douglas N. Greve < dgreve@mgh.harvard.edu> escreveu:
no fsgd file was attached. Also, have you looked at https://secure-web.cisco.com/1xDB2MdU7IttZMHh8Wcpy-H4rASI2uqj9-MUHGYt5B5AJhC... ?
On 9/23/2022 10:04 AM, fernanda rohrsetzer wrote:
External Email - Use CautionHi Freesufer's, I need to run a group analysis but I don't know how to do it, the error always appears (print below). There are 3 groups ( risk_group) that I would like to insert as a class (LR = level 1, HR = level 2 and MDD = level 3) and I would like to control for sex, age and total brain measure. Please, if anyone can help me understand what I'm doing wrong, I'd really appreciate it. The FSG file is attached Thank you.
Freesurfer mailing listFreesurfer@nmr.mgh.harvard.eduhttps://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://secure-web.cisco.com/1IeS-YL57fzD75MFwwJjA4Sd-7EvX1tlEDghimEHC83PSTZ... The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Mass General Brigham Compliance HelpLine at https://secure-web.cisco.com/1lcJ8l8iGsr8svtwqrjcj_YgzO3i4H8osHsQ5MG8o0gSMDm... < https://secure-web.cisco.com/1lcJ8l8iGsr8svtwqrjcj_YgzO3i4H8osHsQ5MG8o0gSMDm... .
look at the fsgd examples to see if any fit your situation. Note that the input needs to be something like Input 310211 LR 1 15,5 2,678785 645292,6651 152275,2 ie, "LR" instead of "1", etc using commas (,) instead of points (.) may cause problems
On 9/25/2022 1:10 PM, fernanda rohrsetzer wrote:
External Email - Use Caution
I'm sorry!
attached the FSGD file.
Em dom., 25 de set. de 2022 às 14:10, Douglas N. Greve dgreve@mgh.harvard.edu escreveu:
no fsgd file was attached. Also, have you looked at *MailScanner has detected a possible fraud attempt from "secure-web.cisco.com" claiming to be* https://surfer.nmr.mgh.harvard.edu/fswiki/FsgdExamples <https://secure-web.cisco.com/1xDB2MdU7IttZMHh8Wcpy-H4rASI2uqj9-MUHGYt5B5AJhCMmszuKV-viLm47WoU7jm403uKh8mLzeA5xcxQoHZQvsbwcGRWH_ptuX-KXJvDiLaUftl-V1VX6CaHAJNGvDardNN7ga4LKaOP2jpFCH5OG_MBWK71pE00hp5FfRsl5tvuqGeGgetChB4DtXaaEVBwBotJ0slybBFLiZSpKXjmQdl23gdAdN5B0aCJoCDC6yWZKkKkeyzIjf6Ami-wCFlRhMjMz90U_NRs0kpqyZIYvJyQ7a_cWmtIXnsRvMhGLkoGgd9tnwE_xwF_aMu_IkvPfBIn6udwK6L9TVjH0sg/https%3A%2F%2Fsurfer.nmr.mgh.harvard.edu%2Ffswiki%2FFsgdExamples> ? On 9/23/2022 10:04 AM, fernanda rohrsetzer wrote:External Email - Use Caution Hi Freesufer's, I need to run a group analysis but I don't know how to do it, the error always appears (print below). There are 3 groups ( risk_group) that I would like to insert as a class (LR = level 1, HR = level 2 and MDD = level 3) and I would like to control for sex, age and total brain measure. Please, if anyone can help me understand what I'm doing wrong, I'd really appreciate it. The FSG file is attached Thank you. _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu *MailScanner has detected a possible fraud attempt from "secure-web.cisco.com" claiming to be* https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer <https://secure-web.cisco.com/1IeS-YL57fzD75MFwwJjA4Sd-7EvX1tlEDghimEHC83PSTZvOaTC6uMGX0MeKlQyTBAimu2DAS98JjAF8rUFAl4eqOG6dAf7DEn9gcnJBQHi7SP8IEjsZrRwbLwfrSOrB4YuKj5JI2j33_LzbO1F75s57wSnEOwgZfit1pTGvtxmDV7iW1wC3FgMxsbk2pZv4Spl1fejTSoTqEdq3IbqUp0br17fLku3me34G20-zVPj6aWecGr4KglnFxOwqfw_g7hoiai7AAwAjveXLBWwL2KQV9IzCL6pLWYPBKbkp_yGV4zQXb15sB4G3WqfLw0smntAbzCh6ZUgoaNxkgrmbiA/https%3A%2F%2Fmail.nmr.mgh.harvard.edu%2Fmailman%2Flistinfo%2Ffreesurfer>_______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu *MailScanner has detected a possible fraud attempt from "secure-web.cisco.com" claiming to be* https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer <https://secure-web.cisco.com/1IeS-YL57fzD75MFwwJjA4Sd-7EvX1tlEDghimEHC83PSTZvOaTC6uMGX0MeKlQyTBAimu2DAS98JjAF8rUFAl4eqOG6dAf7DEn9gcnJBQHi7SP8IEjsZrRwbLwfrSOrB4YuKj5JI2j33_LzbO1F75s57wSnEOwgZfit1pTGvtxmDV7iW1wC3FgMxsbk2pZv4Spl1fejTSoTqEdq3IbqUp0br17fLku3me34G20-zVPj6aWecGr4KglnFxOwqfw_g7hoiai7AAwAjveXLBWwL2KQV9IzCL6pLWYPBKbkp_yGV4zQXb15sB4G3WqfLw0smntAbzCh6ZUgoaNxkgrmbiA/https%3A%2F%2Fmail.nmr.mgh.harvard.edu%2Fmailman%2Flistinfo%2Ffreesurfer> The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Mass General Brigham Compliance HelpLine at *MailScanner has detected a possible fraud attempt from "secure-web.cisco.com" claiming to be* https://www.massgeneralbrigham.org/complianceline <https://secure-web.cisco.com/1lcJ8l8iGsr8svtwqrjcj_YgzO3i4H8osHsQ5MG8o0gSMDmRRUaO02v2siHGL8OJH267EE9rpCJqbHmHeNA2dwDDSYVshI1edCUdw4LQVNdg79MFK7K-hG_m9DSFxk8k4hygrTLezzCgQmakGharcc-FhM6ResORxNNnrX1i0o-P7hJlCk6yBnFeO8G_Om_p-WARUc7EI69ecntT_HF1Pf8o6onpEAWphxwHOeUOjmNjisaQQcB7SwSbhbkp2fZShDqx3TNXAiJUDQyKAaksfscnnb9bpS2-pKhxR1i-NnFejBc0Plkhqxk8X6yb23Fkwd8ftpb22qjX5Eg7_tBHnRg/https%3A%2F%2Fwww.massgeneralbrigham.org%2Fcomplianceline> <*MailScanner has detected a possible fraud attempt from "secure-web.cisco.com" claiming to be* https://www.massgeneralbrigham.org/complianceline <https://secure-web.cisco.com/1lcJ8l8iGsr8svtwqrjcj_YgzO3i4H8osHsQ5MG8o0gSMDmRRUaO02v2siHGL8OJH267EE9rpCJqbHmHeNA2dwDDSYVshI1edCUdw4LQVNdg79MFK7K-hG_m9DSFxk8k4hygrTLezzCgQmakGharcc-FhM6ResORxNNnrX1i0o-P7hJlCk6yBnFeO8G_Om_p-WARUc7EI69ecntT_HF1Pf8o6onpEAWphxwHOeUOjmNjisaQQcB7SwSbhbkp2fZShDqx3TNXAiJUDQyKAaksfscnnb9bpS2-pKhxR1i-NnFejBc0Plkhqxk8X6yb23Fkwd8ftpb22qjX5Eg7_tBHnRg/https%3A%2F%2Fwww.massgeneralbrigham.org%2Fcomplianceline>> .
Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
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Hi, TKS for helping me! I looked at the examples of the FSGD files, but I believe that my data doesn't fit. I've three groups/three factors at three levels (LR=1, HR=2, MDD=3) and 6 covariates (gender, age and global brain measure). I don't know if I was clear in my explanation.
Em seg., 26 de set. de 2022 às 00:06, Douglas N. Greve < dgreve@mgh.harvard.edu> escreveu:
look at the fsgd examples to see if any fit your situation. Note that the input needs to be something like Input 310211 LR 1 15,5 2,678785 645292,6651 152275,2 ie, "LR" instead of "1", etc using commas (,) instead of points (.) may cause problems
On 9/25/2022 1:10 PM, fernanda rohrsetzer wrote:
External Email - Use CautionI'm sorry!
attached the FSGD file.
Em dom., 25 de set. de 2022 às 14:10, Douglas N. Greve < dgreve@mgh.harvard.edu> escreveu:
no fsgd file was attached. Also, have you looked at *MailScanner has detected a possible fraud attempt from "secure-web.cisco.com" claiming to be* https://secure-web.cisco.com/1VZjXbFdR2bL-sDVykjA7yRWxHMulxkgtad-yajUBDe5kxi... https://secure-web.cisco.com/1xDB2MdU7IttZMHh8Wcpy-H4rASI2uqj9-MUHGYt5B5AJhCMmszuKV-viLm47WoU7jm403uKh8mLzeA5xcxQoHZQvsbwcGRWH_ptuX-KXJvDiLaUftl-V1VX6CaHAJNGvDardNN7ga4LKaOP2jpFCH5OG_MBWK71pE00hp5FfRsl5tvuqGeGgetChB4DtXaaEVBwBotJ0slybBFLiZSpKXjmQdl23gdAdN5B0aCJoCDC6yWZKkKkeyzIjf6Ami-wCFlRhMjMz90U_NRs0kpqyZIYvJyQ7a_cWmtIXnsRvMhGLkoGgd9tnwE_xwF_aMu_IkvPfBIn6udwK6L9TVjH0sg/https%3A%2F%2Fsurfer.nmr.mgh.harvard.edu%2Ffswiki%2FFsgdExamples ?
On 9/23/2022 10:04 AM, fernanda rohrsetzer wrote:
External Email - Use CautionHi Freesufer's, I need to run a group analysis but I don't know how to do it, the error always appears (print below). There are 3 groups ( risk_group) that I would like to insert as a class (LR = level 1, HR = level 2 and MDD = level 3) and I would like to control for sex, age and total brain measure. Please, if anyone can help me understand what I'm doing wrong, I'd really appreciate it. The FSG file is attached Thank you.
Freesurfer mailing listFreesurfer@nmr.mgh.harvard.edu*MailScanner has detected a possible fraud attempt from "secure-web.cisco.com" claiming to be* https://secure-web.cisco.com/1RH_rBab9niiaia8Ck5Hx5E6-yCgZbfEFO7mLl9_xQgPrQQ... https://secure-web.cisco.com/1IeS-YL57fzD75MFwwJjA4Sd-7EvX1tlEDghimEHC83PSTZvOaTC6uMGX0MeKlQyTBAimu2DAS98JjAF8rUFAl4eqOG6dAf7DEn9gcnJBQHi7SP8IEjsZrRwbLwfrSOrB4YuKj5JI2j33_LzbO1F75s57wSnEOwgZfit1pTGvtxmDV7iW1wC3FgMxsbk2pZv4Spl1fejTSoTqEdq3IbqUp0br17fLku3me34G20-zVPj6aWecGr4KglnFxOwqfw_g7hoiai7AAwAjveXLBWwL2KQV9IzCL6pLWYPBKbkp_yGV4zQXb15sB4G3WqfLw0smntAbzCh6ZUgoaNxkgrmbiA/https%3A%2F%2Fmail.nmr.mgh.harvard.edu%2Fmailman%2Flistinfo%2Ffreesurfer
Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu *MailScanner has detected a possible fraud attempt from "secure-web.cisco.com" claiming to be* https://secure-web.cisco.com/1RH_rBab9niiaia8Ck5Hx5E6-yCgZbfEFO7mLl9_xQgPrQQ... https://secure-web.cisco.com/1IeS-YL57fzD75MFwwJjA4Sd-7EvX1tlEDghimEHC83PSTZvOaTC6uMGX0MeKlQyTBAimu2DAS98JjAF8rUFAl4eqOG6dAf7DEn9gcnJBQHi7SP8IEjsZrRwbLwfrSOrB4YuKj5JI2j33_LzbO1F75s57wSnEOwgZfit1pTGvtxmDV7iW1wC3FgMxsbk2pZv4Spl1fejTSoTqEdq3IbqUp0br17fLku3me34G20-zVPj6aWecGr4KglnFxOwqfw_g7hoiai7AAwAjveXLBWwL2KQV9IzCL6pLWYPBKbkp_yGV4zQXb15sB4G3WqfLw0smntAbzCh6ZUgoaNxkgrmbiA/https%3A%2F%2Fmail.nmr.mgh.harvard.edu%2Fmailman%2Flistinfo%2Ffreesurfer The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Mass General Brigham Compliance HelpLine at *MailScanner has detected a possible fraud attempt from "secure-web.cisco.com" claiming to be* https://secure-web.cisco.com/1Hq0OU6ngmNnPGbOMhNKANxECK-InbsHZk4wc5jEn8UDURp... https://secure-web.cisco.com/1lcJ8l8iGsr8svtwqrjcj_YgzO3i4H8osHsQ5MG8o0gSMDmRRUaO02v2siHGL8OJH267EE9rpCJqbHmHeNA2dwDDSYVshI1edCUdw4LQVNdg79MFK7K-hG_m9DSFxk8k4hygrTLezzCgQmakGharcc-FhM6ResORxNNnrX1i0o-P7hJlCk6yBnFeO8G_Om_p-WARUc7EI69ecntT_HF1Pf8o6onpEAWphxwHOeUOjmNjisaQQcB7SwSbhbkp2fZShDqx3TNXAiJUDQyKAaksfscnnb9bpS2-pKhxR1i-NnFejBc0Plkhqxk8X6yb23Fkwd8ftpb22qjX5Eg7_tBHnRg/https%3A%2F%2Fwww.massgeneralbrigham.org%2Fcomplianceline <*MailScanner has detected a possible fraud attempt from "secure-web.cisco.com" claiming to be* https://secure-web.cisco.com/1Hq0OU6ngmNnPGbOMhNKANxECK-InbsHZk4wc5jEn8UDURp... https://secure-web.cisco.com/1lcJ8l8iGsr8svtwqrjcj_YgzO3i4H8osHsQ5MG8o0gSMDmRRUaO02v2siHGL8OJH267EE9rpCJqbHmHeNA2dwDDSYVshI1edCUdw4LQVNdg79MFK7K-hG_m9DSFxk8k4hygrTLezzCgQmakGharcc-FhM6ResORxNNnrX1i0o-P7hJlCk6yBnFeO8G_Om_p-WARUc7EI69ecntT_HF1Pf8o6onpEAWphxwHOeUOjmNjisaQQcB7SwSbhbkp2fZShDqx3TNXAiJUDQyKAaksfscnnb9bpS2-pKhxR1i-NnFejBc0Plkhqxk8X6yb23Fkwd8ftpb22qjX5Eg7_tBHnRg/https%3A%2F%2Fwww.massgeneralbrigham.org%2Fcomplianceline> .
Freesurfer mailing listFreesurfer@nmr.mgh.harvard.eduhttps://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://secure-web.cisco.com/1RH_rBab9niiaia8Ck5Hx5E6-yCgZbfEFO7mLl9_xQgPrQQ... The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Mass General Brigham Compliance HelpLine at https://secure-web.cisco.com/1Hq0OU6ngmNnPGbOMhNKANxECK-InbsHZk4wc5jEn8UDURp... < https://secure-web.cisco.com/1Hq0OU6ngmNnPGbOMhNKANxECK-InbsHZk4wc5jEn8UDURp... .
you should be able to generalize two groups/one covariate and/or four groups one covariate. don't use gender as a continuous covariate. Make sure to normalize your covariates
On 9/26/2022 10:30 AM, fernanda rohrsetzer wrote:
External Email - Use Caution
Hi, TKS for helping me! I looked at the examples of the FSGD files, but I believe that my data doesn't fit. I've three groups/three factors at three levels (LR=1, HR=2, MDD=3) and 6 covariates (gender, age and global brain measure). I don't know if I was clear in my explanation.
Em seg., 26 de set. de 2022 às 00:06, Douglas N. Greve dgreve@mgh.harvard.edu escreveu:
look at the fsgd examples to see if any fit your situation. Note that the input needs to be something like Input 310211 LR 1 15,5 2,678785 645292,6651 152275,2 ie, "LR" instead of "1", etc using commas (,) instead of points (.) may cause problems On 9/25/2022 1:10 PM, fernanda rohrsetzer wrote:External Email - Use Caution I'm sorry! attached the FSGD file. Em dom., 25 de set. de 2022 às 14:10, Douglas N. Greve <dgreve@mgh.harvard.edu> escreveu: no fsgd file was attached. Also, have you looked at *MailScanner has detected a possible fraud attempt from "secure-web.cisco.com" claiming to be* https://surfer.nmr.mgh.harvard.edu/fswiki/FsgdExamples <https://secure-web.cisco.com/1xDB2MdU7IttZMHh8Wcpy-H4rASI2uqj9-MUHGYt5B5AJhCMmszuKV-viLm47WoU7jm403uKh8mLzeA5xcxQoHZQvsbwcGRWH_ptuX-KXJvDiLaUftl-V1VX6CaHAJNGvDardNN7ga4LKaOP2jpFCH5OG_MBWK71pE00hp5FfRsl5tvuqGeGgetChB4DtXaaEVBwBotJ0slybBFLiZSpKXjmQdl23gdAdN5B0aCJoCDC6yWZKkKkeyzIjf6Ami-wCFlRhMjMz90U_NRs0kpqyZIYvJyQ7a_cWmtIXnsRvMhGLkoGgd9tnwE_xwF_aMu_IkvPfBIn6udwK6L9TVjH0sg/https%3A%2F%2Fsurfer.nmr.mgh.harvard.edu%2Ffswiki%2FFsgdExamples> ? On 9/23/2022 10:04 AM, fernanda rohrsetzer wrote:External Email - Use Caution Hi Freesufer's, I need to run a group analysis but I don't know how to do it, the error always appears (print below). There are 3 groups ( risk_group) that I would like to insert as a class (LR = level 1, HR = level 2 and MDD = level 3) and I would like to control for sex, age and total brain measure. Please, if anyone can help me understand what I'm doing wrong, I'd really appreciate it. The FSG file is attached Thank you. _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu *MailScanner has detected a possible fraud attempt from "secure-web.cisco.com" claiming to be* https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer <https://secure-web.cisco.com/1IeS-YL57fzD75MFwwJjA4Sd-7EvX1tlEDghimEHC83PSTZvOaTC6uMGX0MeKlQyTBAimu2DAS98JjAF8rUFAl4eqOG6dAf7DEn9gcnJBQHi7SP8IEjsZrRwbLwfrSOrB4YuKj5JI2j33_LzbO1F75s57wSnEOwgZfit1pTGvtxmDV7iW1wC3FgMxsbk2pZv4Spl1fejTSoTqEdq3IbqUp0br17fLku3me34G20-zVPj6aWecGr4KglnFxOwqfw_g7hoiai7AAwAjveXLBWwL2KQV9IzCL6pLWYPBKbkp_yGV4zQXb15sB4G3WqfLw0smntAbzCh6ZUgoaNxkgrmbiA/https%3A%2F%2Fmail.nmr.mgh.harvard.edu%2Fmailman%2Flistinfo%2Ffreesurfer>_______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu *MailScanner has detected a possible fraud attempt from "secure-web.cisco.com" claiming to be* https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer <https://secure-web.cisco.com/1IeS-YL57fzD75MFwwJjA4Sd-7EvX1tlEDghimEHC83PSTZvOaTC6uMGX0MeKlQyTBAimu2DAS98JjAF8rUFAl4eqOG6dAf7DEn9gcnJBQHi7SP8IEjsZrRwbLwfrSOrB4YuKj5JI2j33_LzbO1F75s57wSnEOwgZfit1pTGvtxmDV7iW1wC3FgMxsbk2pZv4Spl1fejTSoTqEdq3IbqUp0br17fLku3me34G20-zVPj6aWecGr4KglnFxOwqfw_g7hoiai7AAwAjveXLBWwL2KQV9IzCL6pLWYPBKbkp_yGV4zQXb15sB4G3WqfLw0smntAbzCh6ZUgoaNxkgrmbiA/https%3A%2F%2Fmail.nmr.mgh.harvard.edu%2Fmailman%2Flistinfo%2Ffreesurfer> The information in this e-mail is intended only for the person to whom it is addressed. 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Douglas N. Greve -
fernanda rohrsetzer