24 Apr
2018
24 Apr
'18
1:19 p.m.
please remember to post to the list ...
Run
tkregister --mov negative_allsocial_proportion.nii --regheader --reg deleteme.lta --s collin --surfs
where collin is the name of the subject you gave when you analyzed the collin brain in recon-all.
If this looks like it is in register, then using --regheader with mri_vol2surf should work. If it is not, then
tkregister --mov negative_allsocial_proportion.nii --identity --reg identity.lta --s collin --surfs
If that looks ok, then save the registration and use that when running mri_vol2surf
On 4/20/18 3:48 PM, srishti goel wrote:
External Email - Use Caution
Hi Douglas,
Following up on where I left, our maps (negative_allsocial_proportion.nii) were created using *neuroelf *software and can be viewed in neuroelf on the *Colins template* (colin_brain_ICBMnorm.vmr). I exported this template as a nifti file and did recon-all for this file but I am still stuck with the same issue. I can run mri_vol2surf on our maps using the colins template but then how do I compare the maps that I am trying to compare because the other map in on the surface of MNI template in FS. I want to be able to produce the two maps on the same surface.
Please let me know if you have thoughts about it.
Thanks so much!
Best, Srishti Social/Clinical Research Specialist Child Imaging Research and Life Experiences Lab University of North Carolina at Chapel Hill email (W): srishtig@email.unc.edu mailto:srishtig@email.unc.edu skype: srishti.goel12
On Thu, Apr 12, 2018 at 10:51 AM, Douglas N. Greve <dgreve@mgh.harvard.edu mailto:dgreve@mgh.harvard.edu> wrote:
Hi Srishti, you will need to be much more specific to allow me to help you. mni152_subject is not a file that can be input to recon-all (it should be a dicom or nifti or mgz). If you use the same input to recon-all that you used to view it in spm, then the FS output should align with your map. On 04/12/2018 10:41 AM, srishti goel wrote: mni152_subject is the file that has been used for recon-all. Our collaborators had run recon-all with that file so we did not do it again. As far as the 'MNI template' is concerned, I didn't do that part of the analysis so I am unsure which specific file it is, but it MNI 152. Best, Srishti Social/Clinical Research Specialist Child Imaging Research and Life Experiences Lab University of North Carolina at Chapel Hill email (W): srishtig@email.unc.edu <mailto:srishtig@email.unc.edu> <mailto:srishtig@email.unc.edu <mailto:srishtig@email.unc.edu>> skype: srishti.goel12 On Thu, Apr 12, 2018 at 10:28 AM, Douglas N. Greve <dgreve@mgh.harvard.edu <mailto:dgreve@mgh.harvard.edu> <mailto:dgreve@mgh.harvard.edu <mailto:dgreve@mgh.harvard.edu>>> wrote: What is the "MNI template" that you are using. I mean an exact file used. Did you use this file when you ran recon-all? On 04/12/2018 10:23 AM, srishti goel wrote: > Yeah, I am unsure where to go from here as well. So the results can be > viewed in SPM and on the MNI template space itself, since SPM > typically does not have a problem showing multiple images in different > sizes. > > Best, > Srishti > Social/Clinical Research Specialist > Child Imaging Research and Life Experiences Lab > University of North Carolina at Chapel Hill > email (W): srishtig@email.unc.edu <mailto:srishtig@email.unc.edu> <mailto:srishtig@email.unc.edu <mailto:srishtig@email.unc.edu>> <mailto:srishtig@email.unc.edu <mailto:srishtig@email.unc.edu> <mailto:srishtig@email.unc.edu <mailto:srishtig@email.unc.edu>>> > skype: srishti.goel12 > > > On Thu, Apr 12, 2018 at 10:11 AM, Douglas N. Greve > <dgreve@mgh.harvard.edu <mailto:dgreve@mgh.harvard.edu> <mailto:dgreve@mgh.harvard.edu <mailto:dgreve@mgh.harvard.edu>> <mailto:dgreve@mgh.harvard.edu <mailto:dgreve@mgh.harvard.edu> <mailto:dgreve@mgh.harvard.edu <mailto:dgreve@mgh.harvard.edu>>>> wrote: > > When you use bbregister, it is expecting the input nii file to > represent > the actual anatomy of the subject, so it does not surprise me that it > does not work that well. I'm not sure what to do about this because a > meta analysis image will never have decent anatomy. In theory, it > should > be already in alignment with the mni152, but this is trickier than it > seems. How do you usually view the results? In FSL or SPM? Do you view > them on an anatomical image? > > > On 04/12/2018 09:03 AM, srishti goel wrote: > > Hi Douglas, > > > > The negative_allsocial_proportion.nii file has actually been > converted > > from a vmp file - 'negative_allsocial.vmp'. We used neruoelf to > > convert the vmp file, option - 'export to analze' and 'export to > > nifti'. The original vmp file represent the results of a > meta-analysis. > > > > Let me know if that helps or you would need more information. > > > > Thanks! > > > > Best, > > Srishti > > > > Best, > > Srishti > > Social/Clinical Research Specialist > > Child Imaging Research and Life Experiences Lab > > University of North Carolina at Chapel Hill > > email (W): srishtig@email.unc.edu <mailto:srishtig@email.unc.edu> <mailto:srishtig@email.unc.edu <mailto:srishtig@email.unc.edu>> > <mailto:srishtig@email.unc.edu <mailto:srishtig@email.unc.edu> <mailto:srishtig@email.unc.edu <mailto:srishtig@email.unc.edu>>> <mailto:srishtig@email.unc.edu <mailto:srishtig@email.unc.edu> <mailto:srishtig@email.unc.edu <mailto:srishtig@email.unc.edu>> > <mailto:srishtig@email.unc.edu <mailto:srishtig@email.unc.edu> <mailto:srishtig@email.unc.edu <mailto:srishtig@email.unc.edu>>>> > > skype: srishti.goel12 > > > > > > On Wed, Apr 11, 2018 at 11:30 PM, Douglas Greve > > <dgreve@mgh.harvard.edu <mailto:dgreve@mgh.harvard.edu> <mailto:dgreve@mgh.harvard.edu <mailto:dgreve@mgh.harvard.edu>> <mailto:dgreve@mgh.harvard.edu <mailto:dgreve@mgh.harvard.edu> <mailto:dgreve@mgh.harvard.edu <mailto:dgreve@mgh.harvard.edu>>> > <mailto:dgreve@mgh.harvard.edu <mailto:dgreve@mgh.harvard.edu> <mailto:dgreve@mgh.harvard.edu <mailto:dgreve@mgh.harvard.edu>> <mailto:dgreve@mgh.harvard.edu <mailto:dgreve@mgh.harvard.edu> <mailto:dgreve@mgh.harvard.edu <mailto:dgreve@mgh.harvard.edu>>>>> > wrote: > > > > how was negative_allsocial_proportion.nii created? > > > > > > On 4/11/18 9:14 PM, srishti goel wrote: > >> Hi, > >> > >> I used bbregister to register: > >> bbregister --mov negative_allsocial_proportion.nii --s > >> mni152_subject --bold --lta register.lta > >> and then viewed it using: > >> tkregisterfv --mov negative_allsocial_proportion.nii --reg > >> register.lta --surfs > >> It doesn't look great but it still looks okay (Screenshot > attached). > >> Then I also used lta in tkregisterfv, as: > >> tkregisterfv --mov negative_allsocial_proportion.nii --reg > >> register.lta --s mni152_subject --surfs --reg reg.deleteme.dat > >> In this file, the volume map still lies outside the surface. > >> Could you please help me resolve this issue. > >> I tried using register.lta file in the mri_vol2surf but the > >> overlay map doesn't show up again. > >> Thanks! > >> > >> Best, > >> Srishti > >> Social/Clinical Research Specialist > >> Child Imaging Research and Life Experiences Lab > >> University of North Carolina at Chapel Hill > >> email (W): srishtig@email.unc.edu <mailto:srishtig@email.unc.edu> <mailto:srishtig@email.unc.edu <mailto:srishtig@email.unc.edu>> > <mailto:srishtig@email.unc.edu <mailto:srishtig@email.unc.edu> <mailto:srishtig@email.unc.edu <mailto:srishtig@email.unc.edu>>> <mailto:srishtig@email.unc.edu <mailto:srishtig@email.unc.edu> <mailto:srishtig@email.unc.edu <mailto:srishtig@email.unc.edu>> > <mailto:srishtig@email.unc.edu <mailto:srishtig@email.unc.edu> <mailto:srishtig@email.unc.edu <mailto:srishtig@email.unc.edu>>>> > >> skype: srishti.goel12 > >> > >> > >> On Tue, Apr 10, 2018 at 11:50 PM, Douglas Greve > >> <dgreve@mgh.harvard.edu <mailto:dgreve@mgh.harvard.edu> <mailto:dgreve@mgh.harvard.edu <mailto:dgreve@mgh.harvard.edu>> <mailto:dgreve@mgh.harvard.edu <mailto:dgreve@mgh.harvard.edu> <mailto:dgreve@mgh.harvard.edu <mailto:dgreve@mgh.harvard.edu>>> > <mailto:dgreve@mgh.harvard.edu <mailto:dgreve@mgh.harvard.edu> <mailto:dgreve@mgh.harvard.edu <mailto:dgreve@mgh.harvard.edu>> <mailto:dgreve@mgh.harvard.edu <mailto:dgreve@mgh.harvard.edu> <mailto:dgreve@mgh.harvard.edu <mailto:dgreve@mgh.harvard.edu>>>>> > wrote: > >> > >> don't use --init-rr ( you don't need to spec an init in > >> version 6) > >> > >> > >> On 4/10/18 9:48 PM, srishti goel wrote: > >>> When I run bbregister, it gives me an error. Attached > is the > >>> register.dat.log file for it. > >>> Error: > >>> > >>> reading source './tmp.bbregister.91068/template.nii'... > >>> > >>> mri_robust_register.bin: only pass single frame MRI source > >>> ./tmp.bbregister.91068/template.nii. > >>> > >>> > >>> No such file or directory > >>> > >>> > >>> Any help is greatly appreciated! > >>> > >>> > >>> Best, > >>> Srishti > >>> Social/Clinical Research Specialist > >>> Child Imaging Research and Life Experiences Lab > >>> University of North Carolina at Chapel Hill > >>> email (W): srishtig@email.unc.edu <mailto:srishtig@email.unc.edu> <mailto:srishtig@email.unc.edu <mailto:srishtig@email.unc.edu>> > <mailto:srishtig@email.unc.edu <mailto:srishtig@email.unc.edu> <mailto:srishtig@email.unc.edu <mailto:srishtig@email.unc.edu>>> > >>> <mailto:srishtig@email.unc.edu <mailto:srishtig@email.unc.edu> <mailto:srishtig@email.unc.edu <mailto:srishtig@email.unc.edu>> > <mailto:srishtig@email.unc.edu <mailto:srishtig@email.unc.edu> <mailto:srishtig@email.unc.edu <mailto:srishtig@email.unc.edu>>>> > >>> skype: srishti.goel12 > >>> > >>> > >>> On Tue, Apr 10, 2018 at 11:07 AM, Douglas Greve > >>> <dgreve@mgh.harvard.edu <mailto:dgreve@mgh.harvard.edu> <mailto:dgreve@mgh.harvard.edu <mailto:dgreve@mgh.harvard.edu>> <mailto:dgreve@mgh.harvard.edu <mailto:dgreve@mgh.harvard.edu> <mailto:dgreve@mgh.harvard.edu <mailto:dgreve@mgh.harvard.edu>>> > <mailto:dgreve@mgh.harvard.edu <mailto:dgreve@mgh.harvard.edu> <mailto:dgreve@mgh.harvard.edu <mailto:dgreve@mgh.harvard.edu>> <mailto:dgreve@mgh.harvard.edu <mailto:dgreve@mgh.harvard.edu> <mailto:dgreve@mgh.harvard.edu <mailto:dgreve@mgh.harvard.edu>>>>> > wrote: > >>> > >>> They are not in registration. Try running > bbregister to > >>> create a registration file (lta), then pass the lta to > >>> tkregisterfv instead of --regheader > >>> > >>> > >>> On 4/9/18 11:49 PM, Bruce Fischl wrote: > >>>> How did you generate the registration? And give > us the > >>>> details of what you are trying to register > >>>> Cheers > >>>> Bruce > >>>> > >>>> On Apr 8, 2018, at 2:55 PM, srishti goel > >>>> <23srishtigoel@gmail.com <mailto:23srishtigoel@gmail.com> <mailto:23srishtigoel@gmail.com <mailto:23srishtigoel@gmail.com>> > <mailto:23srishtigoel@gmail.com <mailto:23srishtigoel@gmail.com> <mailto:23srishtigoel@gmail.com <mailto:23srishtigoel@gmail.com>>> > >>>> <mailto:23srishtigoel@gmail.com <mailto:23srishtigoel@gmail.com> <mailto:23srishtigoel@gmail.com <mailto:23srishtigoel@gmail.com>> > <mailto:23srishtigoel@gmail.com <mailto:23srishtigoel@gmail.com> <mailto:23srishtigoel@gmail.com <mailto:23srishtigoel@gmail.com>>>>> wrote: > >>>> > >>>>> Hi Bruce, > >>>>> > >>>>> Thanks so much for pointing that out, I totally > missed > >>>>> that part. > >>>>> > >>>>> Also, the registration definitely isn't appropriate. > >>>>> Could someone please guide me how to correct this > >>>>> problem. I have attached a screenshot of how it > looks > >>>>> like currently. > >>>>> > >>>>> > >>>>> <Screen Shot 2018-04-08 at 2.53.33 PM.png> > >>>>> > >>>>> Best, > >>>>> Srishti > >>>>> Social/Clinical Research Specialist > >>>>> Child Imaging Research and Life Experiences Lab > >>>>> University of North Carolina at Chapel Hill > >>>>> email (W): srishtig@email.unc.edu <mailto:srishtig@email.unc.edu> <mailto:srishtig@email.unc.edu <mailto:srishtig@email.unc.edu>> > <mailto:srishtig@email.unc.edu <mailto:srishtig@email.unc.edu> <mailto:srishtig@email.unc.edu <mailto:srishtig@email.unc.edu>>> > >>>>> <mailto:srishtig@email.unc.edu <mailto:srishtig@email.unc.edu> <mailto:srishtig@email.unc.edu <mailto:srishtig@email.unc.edu>> > <mailto:srishtig@email.unc.edu <mailto:srishtig@email.unc.edu> <mailto:srishtig@email.unc.edu <mailto:srishtig@email.unc.edu>>>> > >>>>> skype: srishti.goel12 > >>>>> > >>>>> > >>>>> On Sun, Apr 8, 2018 at 11:00 AM, Bruce Fischl > >>>>> <fischl@nmr.mgh.harvard.edu <mailto:fischl@nmr.mgh.harvard.edu> <mailto:fischl@nmr.mgh.harvard.edu <mailto:fischl@nmr.mgh.harvard.edu>> > <mailto:fischl@nmr.mgh.harvard.edu <mailto:fischl@nmr.mgh.harvard.edu> <mailto:fischl@nmr.mgh.harvard.edu <mailto:fischl@nmr.mgh.harvard.edu>>> > >>>>> <mailto:fischl@nmr.mgh.harvard.edu <mailto:fischl@nmr.mgh.harvard.edu> <mailto:fischl@nmr.mgh.harvard.edu <mailto:fischl@nmr.mgh.harvard.edu>> > <mailto:fischl@nmr.mgh.harvard.edu <mailto:fischl@nmr.mgh.harvard.edu> <mailto:fischl@nmr.mgh.harvard.edu <mailto:fischl@nmr.mgh.harvard.edu>>>>> wrote: > >>>>> > >>>>> Hi Srishti > >>>>> > >>>>> the directory you are in doesn't matter. YOu > >>>>> either need to set SUBJECTS_DIR in the > >>>>> environment, or use --sd <SUBJECTS_DIR> to > specify the > >>>>> directory that contains your subjects. I > think you > >>>>> can also give it the full path to a target > volume > >>>>> if you want, but maybe Doug can comment as he > >>>>> knows this stuff better than I do > >>>>> > >>>>> cheers > >>>>> Bruce > >>>>> > >>>>> > >>>>> > >>>>> On Sun, 8 Apr 2018, srishti goel wrote: > >>>>> > >>>>> When I type this command:tkregisterfv --mov > >>>>> negative_allsocial_proportion.nii --regheader --s > >>>>> mni152_subject --surfs --reg > reg.deleteme.dat > >>>>> > >>>>> It gives me the error: cannot find > mni152_subject. > >>>>> Although I clearly checked that the > directory > >>>>> from which I am submitting this command > has the > >>>>> mni152_subject directory within which there > >>>>> are all the other required directories such > >>>>> as: mri, > >>>>> stats, surf, scripts, etc. > >>>>> > >>>>> I am unsure what is happening here. > >>>>> > >>>>> > >>>>> Best, > >>>>> Srishti > >>>>> Social/Clinical Research Specialist > >>>>> Child Imaging Research and Life > Experiences Lab > >>>>> University of North Carolina at Chapel Hill > >>>>> email (W): srishtig@email.unc.edu <mailto:srishtig@email.unc.edu> <mailto:srishtig@email.unc.edu <mailto:srishtig@email.unc.edu>> > <mailto:srishtig@email.unc.edu <mailto:srishtig@email.unc.edu> <mailto:srishtig@email.unc.edu <mailto:srishtig@email.unc.edu>>> > >>>>> <mailto:srishtig@email.unc.edu <mailto:srishtig@email.unc.edu> <mailto:srishtig@email.unc.edu <mailto:srishtig@email.unc.edu>> > <mailto:srishtig@email.unc.edu <mailto:srishtig@email.unc.edu> <mailto:srishtig@email.unc.edu <mailto:srishtig@email.unc.edu>>>> > >>>>> skype: srishti.goel12 > >>>>> > >>>>> > >>>>> On Thu, Apr 5, 2018 at 12:49 PM, Douglas N. > >>>>> Greve <dgreve@mgh.harvard.edu <mailto:dgreve@mgh.harvard.edu> <mailto:dgreve@mgh.harvard.edu <mailto:dgreve@mgh.harvard.edu>> > <mailto:dgreve@mgh.harvard.edu <mailto:dgreve@mgh.harvard.edu> <mailto:dgreve@mgh.harvard.edu <mailto:dgreve@mgh.harvard.edu>>> > >>>>> <mailto:dgreve@mgh.harvard.edu <mailto:dgreve@mgh.harvard.edu> <mailto:dgreve@mgh.harvard.edu <mailto:dgreve@mgh.harvard.edu>> > <mailto:dgreve@mgh.harvard.edu <mailto:dgreve@mgh.harvard.edu> <mailto:dgreve@mgh.harvard.edu <mailto:dgreve@mgh.harvard.edu>>>>> wrote: > >>>>> Those commands look ok. My suspicion > >>>>> goes to the use of --regheader. See > >>>>> whether the registration is ok with > >>>>> > >>>>> tkregisterfv --mov > >>>>> negative_allsocial_proportion.nii --regheader --s > >>>>> mni152_subject --surfs --reg > reg.deleteme.dat > >>>>> > >>>>> > >>>>> On 04/05/2018 08:34 AM, srishti > goel wrote: > >>>>> > Hi, > >>>>> > > >>>>> > I am trying to compare my volume > maps > >>>>> > > (negative_allsocial_proportion.nii) to > >>>>> someone else's > >>>>> > (SN_like_cortical_lh.nii.gz) who > have > >>>>> it on a surface > >>>>> > (mni152_subject). So I used the > steps > >>>>> for mri_vol2surf command as > >>>>> > follows: > >>>>> > > >>>>> > Commands: > >>>>> > mri_vol2surf --src > >>>>> negative_allsocial_proportion.nii --regheader > >>>>> > mni152_subject --hemi lh --o > >>>>> ./neg_allsocial_lh.nii --projfrac 0.5 > >>>>> > Then to view it: > >>>>> > tksurfer mni152_subject lh inflated > >>>>> -overlay ./neg_allsocial_lh.nii > >>>>> > -overlay SN_like_cortical_lh.nii.gz > >>>>> -fthresh 0.5 > >>>>> > > >>>>> > Everything ran fine and we > didn't get > >>>>> any error but then while viewing > >>>>> > the files we could not see our map > >>>>> (neg_allsocail_lh.nii) on the > >>>>> > surface. This file seemed to > work fine > >>>>> as it is not an empty file when > >>>>> > I checked the file size. > However, when > >>>>> we view it using tksurfer it > >>>>> > does not show up as a highlighted > >>>>> portion on the surface. The > >>>>> > SN_like_cortical_lh.nii.gz file > shows > >>>>> up just fine. > >>>>> > > >>>>> > Could someone please help me figure > >>>>> out what might have gone wrong here. > >>>>> > > >>>>> > Thanks so much! > >>>>> > > >>>>> > > >>>>> > > >>>>> > > _______________________________________________ > >>>>> > Freesurfer mailing list > >>>>> > Freesurfer@nmr.mgh.harvard.edu <mailto:Freesurfer@nmr.mgh.harvard.edu> <mailto:Freesurfer@nmr.mgh.harvard.edu <mailto:Freesurfer@nmr.mgh.harvard.edu>> > <mailto:Freesurfer@nmr.mgh.harvard.edu <mailto:Freesurfer@nmr.mgh.harvard.edu> <mailto:Freesurfer@nmr.mgh.harvard.edu <mailto:Freesurfer@nmr.mgh.harvard.edu>>> > >>>>> <mailto:Freesurfer@nmr.mgh.harvard.edu <mailto:Freesurfer@nmr.mgh.harvard.edu> <mailto:Freesurfer@nmr.mgh.harvard.edu <mailto:Freesurfer@nmr.mgh.harvard.edu>> > <mailto:Freesurfer@nmr.mgh.harvard.edu <mailto:Freesurfer@nmr.mgh.harvard.edu> <mailto:Freesurfer@nmr.mgh.harvard.edu <mailto:Freesurfer@nmr.mgh.harvard.edu>>>> > >>>>> > > >>>>> https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer <https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer> <https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer <https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer>> > <https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer <https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer> <https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer <https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer>>> > >>>>> <https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer <https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer> <https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer <https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer>> > <https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer <https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer> <https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer <https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer>>>> > >>>>> > >>>>> _______________________________________________ > >>>>> Freesurfer mailing list > >>>>> Freesurfer@nmr.mgh.harvard.edu <mailto:Freesurfer@nmr.mgh.harvard.edu> <mailto:Freesurfer@nmr.mgh.harvard.edu <mailto:Freesurfer@nmr.mgh.harvard.edu>> > <mailto:Freesurfer@nmr.mgh.harvard.edu <mailto:Freesurfer@nmr.mgh.harvard.edu> <mailto:Freesurfer@nmr.mgh.harvard.edu <mailto:Freesurfer@nmr.mgh.harvard.edu>>> > >>>>> <mailto:Freesurfer@nmr.mgh.harvard.edu <mailto:Freesurfer@nmr.mgh.harvard.edu> <mailto:Freesurfer@nmr.mgh.harvard.edu <mailto:Freesurfer@nmr.mgh.harvard.edu>> > <mailto:Freesurfer@nmr.mgh.harvard.edu <mailto:Freesurfer@nmr.mgh.harvard.edu> <mailto:Freesurfer@nmr.mgh.harvard.edu <mailto:Freesurfer@nmr.mgh.harvard.edu>>>> > >>>>> https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer <https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer> <https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer <https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer>> > <https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer <https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer> <https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer <https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer>>> > >>>>> <https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer <https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer> <https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer <https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer>> > <https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer <https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer> <https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer <https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer>>>> > >>>>> > >>>>> > >>>>> The information in this e-mail is intended > >>>>> only for the person to whom it is > >>>>> addressed. If you believe this e-mail > was sent > >>>>> to you in error and the e-mail > >>>>> contains patient information, please contact > >>>>> the Partners Compliance HelpLine at > >>>>> http://www.partners.org/complianceline <http://www.partners.org/complianceline> <http://www.partners.org/complianceline <http://www.partners.org/complianceline>> > <http://www.partners.org/complianceline <http://www.partners.org/complianceline> <http://www.partners.org/complianceline <http://www.partners.org/complianceline>>> > >>>>> <http://www.partners.org/complianceline <http://www.partners.org/complianceline> <http://www.partners.org/complianceline <http://www.partners.org/complianceline>> > <http://www.partners.org/complianceline <http://www.partners.org/complianceline> <http://www.partners.org/complianceline <http://www.partners.org/complianceline>>>> . If > >>>>> the e-mail was sent to you in error > >>>>> but does not contain patient information, > >>>>> please contact the sender and properly > >>>>> dispose of the e-mail. > >>>>> > >>>>> > >>>>> > >>>>> > >>>>> _______________________________________________ > >>>>> Freesurfer mailing list > >>>>> Freesurfer@nmr.mgh.harvard.edu <mailto:Freesurfer@nmr.mgh.harvard.edu> <mailto:Freesurfer@nmr.mgh.harvard.edu <mailto:Freesurfer@nmr.mgh.harvard.edu>> > <mailto:Freesurfer@nmr.mgh.harvard.edu <mailto:Freesurfer@nmr.mgh.harvard.edu> <mailto:Freesurfer@nmr.mgh.harvard.edu <mailto:Freesurfer@nmr.mgh.harvard.edu>>> > >>>>> <mailto:Freesurfer@nmr.mgh.harvard.edu <mailto:Freesurfer@nmr.mgh.harvard.edu> <mailto:Freesurfer@nmr.mgh.harvard.edu <mailto:Freesurfer@nmr.mgh.harvard.edu>> > <mailto:Freesurfer@nmr.mgh.harvard.edu <mailto:Freesurfer@nmr.mgh.harvard.edu> <mailto:Freesurfer@nmr.mgh.harvard.edu <mailto:Freesurfer@nmr.mgh.harvard.edu>>>> > >>>>> https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer <https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer> <https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer <https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer>> > <https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer <https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer> <https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer <https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer>>> > >>>>> <https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer <https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer> <https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer <https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer>> > <https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer <https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer> <https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer <https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer>>>> > >>>>> > >>>>> > >>>>> The information in this e-mail is intended only > >>>>> for the person to whom it is > >>>>> addressed. If you believe this e-mail was > sent to > >>>>> you in error and the e-mail > >>>>> contains patient information, please contact the > >>>>> Partners Compliance HelpLine at > >>>>> http://www.partners.org/complianceline <http://www.partners.org/complianceline> <http://www.partners.org/complianceline <http://www.partners.org/complianceline>> > <http://www.partners.org/complianceline <http://www.partners.org/complianceline> <http://www.partners.org/complianceline <http://www.partners.org/complianceline>>> > >>>>> <http://www.partners.org/complianceline <http://www.partners.org/complianceline> <http://www.partners.org/complianceline <http://www.partners.org/complianceline>> > <http://www.partners.org/complianceline <http://www.partners.org/complianceline> <http://www.partners.org/complianceline <http://www.partners.org/complianceline>>>> . If the > >>>>> e-mail was sent to you in error > >>>>> but does not contain patient information, please > >>>>> contact the sender and properly > >>>>> dispose of the e-mail. > >>>>> > >>>>> > >>>>> _______________________________________________ > >>>>> Freesurfer mailing list > >>>>> Freesurfer@nmr.mgh.harvard.edu <mailto:Freesurfer@nmr.mgh.harvard.edu> <mailto:Freesurfer@nmr.mgh.harvard.edu <mailto:Freesurfer@nmr.mgh.harvard.edu>> > <mailto:Freesurfer@nmr.mgh.harvard.edu <mailto:Freesurfer@nmr.mgh.harvard.edu> <mailto:Freesurfer@nmr.mgh.harvard.edu <mailto:Freesurfer@nmr.mgh.harvard.edu>>> > >>>>> <mailto:Freesurfer@nmr.mgh.harvard.edu <mailto:Freesurfer@nmr.mgh.harvard.edu> <mailto:Freesurfer@nmr.mgh.harvard.edu <mailto:Freesurfer@nmr.mgh.harvard.edu>> > <mailto:Freesurfer@nmr.mgh.harvard.edu <mailto:Freesurfer@nmr.mgh.harvard.edu> <mailto:Freesurfer@nmr.mgh.harvard.edu <mailto:Freesurfer@nmr.mgh.harvard.edu>>>> > >>>>> https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer <https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer> <https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer <https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer>> > <https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer <https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer> <https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer <https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer>>> > >>>>> <https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer <https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer> <https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer <https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer>> > <https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer <https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer> <https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer <https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer>>>> > >>>> > >>>> > >>>> _______________________________________________ > >>>> Freesurfer mailing list > >>>> Freesurfer@nmr.mgh.harvard.edu <mailto:Freesurfer@nmr.mgh.harvard.edu> <mailto:Freesurfer@nmr.mgh.harvard.edu <mailto:Freesurfer@nmr.mgh.harvard.edu>> > <mailto:Freesurfer@nmr.mgh.harvard.edu <mailto:Freesurfer@nmr.mgh.harvard.edu> <mailto:Freesurfer@nmr.mgh.harvard.edu <mailto:Freesurfer@nmr.mgh.harvard.edu>>> > >>>> <mailto:Freesurfer@nmr.mgh.harvard.edu <mailto:Freesurfer@nmr.mgh.harvard.edu> <mailto:Freesurfer@nmr.mgh.harvard.edu <mailto:Freesurfer@nmr.mgh.harvard.edu>> > <mailto:Freesurfer@nmr.mgh.harvard.edu <mailto:Freesurfer@nmr.mgh.harvard.edu> <mailto:Freesurfer@nmr.mgh.harvard.edu <mailto:Freesurfer@nmr.mgh.harvard.edu>>>> > >>>> https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer <https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer> <https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer <https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer>> > <https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer <https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer> <https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer <https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer>>> > >>>> <https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer <https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer> <https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer <https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer>> > <https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer <https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer> <https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer <https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer>>>> > >>> > >>> > >>> _______________________________________________ > >>> Freesurfer mailing list > >>> Freesurfer@nmr.mgh.harvard.edu <mailto:Freesurfer@nmr.mgh.harvard.edu> <mailto:Freesurfer@nmr.mgh.harvard.edu <mailto:Freesurfer@nmr.mgh.harvard.edu>> > <mailto:Freesurfer@nmr.mgh.harvard.edu <mailto:Freesurfer@nmr.mgh.harvard.edu> <mailto:Freesurfer@nmr.mgh.harvard.edu <mailto:Freesurfer@nmr.mgh.harvard.edu>>> > >>> <mailto:Freesurfer@nmr.mgh.harvard.edu <mailto:Freesurfer@nmr.mgh.harvard.edu> <mailto:Freesurfer@nmr.mgh.harvard.edu <mailto:Freesurfer@nmr.mgh.harvard.edu>> > <mailto:Freesurfer@nmr.mgh.harvard.edu <mailto:Freesurfer@nmr.mgh.harvard.edu> <mailto:Freesurfer@nmr.mgh.harvard.edu <mailto:Freesurfer@nmr.mgh.harvard.edu>>>> > >>> https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer <https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer> <https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer <https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer>> > <https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer <https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer> <https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer <https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer>>> > >>> <https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer <https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer> <https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer <https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer>> > <https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer <https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer> <https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer <https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer>>>> > >>> > >>> > >>> The information in this e-mail is intended only > for the > >>> person to whom it is > >>> addressed. If you believe this e-mail was sent to > you in > >>> error and the e-mail > >>> contains patient information, please contact the > >>> Partners Compliance HelpLine at > >>> http://www.partners.org/complianceline <http://www.partners.org/complianceline> <http://www.partners.org/complianceline <http://www.partners.org/complianceline>> > <http://www.partners.org/complianceline <http://www.partners.org/complianceline> <http://www.partners.org/complianceline <http://www.partners.org/complianceline>>> > >>> <http://www.partners.org/complianceline <http://www.partners.org/complianceline> <http://www.partners.org/complianceline <http://www.partners.org/complianceline>> > <http://www.partners.org/complianceline <http://www.partners.org/complianceline> <http://www.partners.org/complianceline <http://www.partners.org/complianceline>>>> . If the e-mail > >>> was sent to you in error > >>> but does not contain patient information, please > contact > >>> the sender and properly > >>> dispose of the e-mail. > >>> > >>> > >>> > >>> > >>> _______________________________________________ > >>> Freesurfer mailing list > >>> Freesurfer@nmr.mgh.harvard.edu <mailto:Freesurfer@nmr.mgh.harvard.edu> <mailto:Freesurfer@nmr.mgh.harvard.edu <mailto:Freesurfer@nmr.mgh.harvard.edu>> > <mailto:Freesurfer@nmr.mgh.harvard.edu <mailto:Freesurfer@nmr.mgh.harvard.edu> <mailto:Freesurfer@nmr.mgh.harvard.edu <mailto:Freesurfer@nmr.mgh.harvard.edu>>> > >>> <mailto:Freesurfer@nmr.mgh.harvard.edu <mailto:Freesurfer@nmr.mgh.harvard.edu> <mailto:Freesurfer@nmr.mgh.harvard.edu <mailto:Freesurfer@nmr.mgh.harvard.edu>> > <mailto:Freesurfer@nmr.mgh.harvard.edu <mailto:Freesurfer@nmr.mgh.harvard.edu> <mailto:Freesurfer@nmr.mgh.harvard.edu <mailto:Freesurfer@nmr.mgh.harvard.edu>>>> > >>> https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer <https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer> <https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer <https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer>> > <https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer <https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer> <https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer <https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer>>> > >>> <https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer <https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer> <https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer <https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer>> > <https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer <https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer> <https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer <https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer>>>> > >> > >> > >> _______________________________________________ > >> Freesurfer mailing list > >> Freesurfer@nmr.mgh.harvard.edu <mailto:Freesurfer@nmr.mgh.harvard.edu> <mailto:Freesurfer@nmr.mgh.harvard.edu <mailto:Freesurfer@nmr.mgh.harvard.edu>> > <mailto:Freesurfer@nmr.mgh.harvard.edu <mailto:Freesurfer@nmr.mgh.harvard.edu> <mailto:Freesurfer@nmr.mgh.harvard.edu <mailto:Freesurfer@nmr.mgh.harvard.edu>>> > >> <mailto:Freesurfer@nmr.mgh.harvard.edu <mailto:Freesurfer@nmr.mgh.harvard.edu> <mailto:Freesurfer@nmr.mgh.harvard.edu <mailto:Freesurfer@nmr.mgh.harvard.edu>> > <mailto:Freesurfer@nmr.mgh.harvard.edu <mailto:Freesurfer@nmr.mgh.harvard.edu> <mailto:Freesurfer@nmr.mgh.harvard.edu <mailto:Freesurfer@nmr.mgh.harvard.edu>>>> > >> https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer <https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer> <https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer <https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer>> > <https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer <https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer> <https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer <https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer>>> > >> <https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer <https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer> <https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer <https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer>> > <https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer <https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer> <https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer <https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer>>>> > >> > >> > >> The information in this e-mail is intended only for the > >> person to whom it is > >> addressed. If you believe this e-mail was sent to you in > >> error and the e-mail > >> contains patient information, please contact the Partners > >> Compliance HelpLine at > >> http://www.partners.org/complianceline <http://www.partners.org/complianceline> <http://www.partners.org/complianceline <http://www.partners.org/complianceline>> > <http://www.partners.org/complianceline <http://www.partners.org/complianceline> <http://www.partners.org/complianceline <http://www.partners.org/complianceline>>> > >> <http://www.partners.org/complianceline <http://www.partners.org/complianceline> <http://www.partners.org/complianceline <http://www.partners.org/complianceline>> > <http://www.partners.org/complianceline <http://www.partners.org/complianceline> <http://www.partners.org/complianceline <http://www.partners.org/complianceline>>>> . If the e-mail was > >> sent to you in error > >> but does not contain patient information, please > contact the > >> sender and properly > >> dispose of the e-mail. > >> > >> > >> > >> > >> _______________________________________________ > >> Freesurfer mailing list > >> Freesurfer@nmr.mgh.harvard.edu <mailto:Freesurfer@nmr.mgh.harvard.edu> <mailto:Freesurfer@nmr.mgh.harvard.edu <mailto:Freesurfer@nmr.mgh.harvard.edu>> > <mailto:Freesurfer@nmr.mgh.harvard.edu <mailto:Freesurfer@nmr.mgh.harvard.edu> <mailto:Freesurfer@nmr.mgh.harvard.edu <mailto:Freesurfer@nmr.mgh.harvard.edu>>> > >> <mailto:Freesurfer@nmr.mgh.harvard.edu <mailto:Freesurfer@nmr.mgh.harvard.edu> <mailto:Freesurfer@nmr.mgh.harvard.edu <mailto:Freesurfer@nmr.mgh.harvard.edu>> > <mailto:Freesurfer@nmr.mgh.harvard.edu <mailto:Freesurfer@nmr.mgh.harvard.edu> <mailto:Freesurfer@nmr.mgh.harvard.edu <mailto:Freesurfer@nmr.mgh.harvard.edu>>>> > >> https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer <https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer> <https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer <https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer>> > <https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer <https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer> <https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer <https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer>>> ... 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freesurfer@nmr.mgh.harvard.edu
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Douglas Greve