Yes--- the ventricles. I am guessing whether it is because the brain is of subject who has some kind of disease. My goal is to segment the subcortical structures like Basal Ganglia. Does this affect my segmentation follows?

Best, Xiaoying

2010/12/10 Bruce Fischl fischl@nmr.mgh.harvard.edu

Hi Xiaoying,

do you mean the ventricles? They are pretty big and may not have been labeled accurately. The cortex is hard to tell the way you have it windowed.

cheers Bruuce

On Fri, 10 Dec 2010, Xiaoying Tang wrote:

Hi All,

...

When use tkemedit to view my results of autorecon2, I got the attached image. I think this is not correct(I am not very sure). Is there any one know why this happens and any way to solve this?

Thanks a lot.

Best, Xiaoying

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