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Hello dear all,
I want to use Freesurfer-Samseg for MS lesion segmentation(cross-sectional). I have read the paper, accordingly I want to try the t1-flair combination in terms of the accuracy.
Do you have any experience with T1 images with contrast agent? I couldn't find anything related to those in the paper. Can I use t1 with contrast in a few patients if the patient doesn't have t1 image without contrast agent? i will declare this situation in the results.
Best, Dilek
freesurfer@nmr.mgh.harvard.edu