I want to show a group of 5 labels ach with a different color in tkmedit (Orig.mgz) display can I manipulate the colors of these lables I am able to do this in tksurfer: not tkmedit. Am I missing something?
Cheers Lena _______________________________________________________ Lena Palaniyappan PhD Student & Honorary StR | Division of Psychiatry ( University of Nottingham) South Block 'A' floor| Queens Medical Centre | Nottingham | NG7 2UH
This message has been checked for viruses but the contents of an attachment may still contain software viruses which could damage your computer system: you are advised to perform your own checks. Email communications with the University of Nottingham may be monitored as permitted by UK legislation.
Hi Lena,
I'm not sure you can do this in tkmedit. You might try freeview instead.
cheers Bruce On Wed, 19 May 2010, Lena Palaniyappan wrote:
I want to show a group of 5 labels ach with a different color in tkmedit (Orig.mgz) display can I manipulate the colors of these lables I am able to do this in tksurfer: not tkmedit. Am I missing something?
Cheers Lena _______________________________________________________ Lena Palaniyappan PhD Student & Honorary StR | Division of Psychiatry ( University of Nottingham) South Block 'A' floor| Queens Medical Centre | Nottingham | NG7 2UH
This message has been checked for viruses but the contents of an attachment may still contain software viruses which could damage your computer system: you are advised to perform your own checks. Email communications with the University of Nottingham may be monitored as permitted by UK legislation.
I don't seem to get freeview on commandline - where can I download this?
Thanks LKP
On 19/05/2010 17:47, "Bruce Fischl" fischl@nmr.mgh.harvard.edu wrote:
Hi Lena,
I'm not sure you can do this in tkmedit. You might try freeview instead.
cheers Bruce On Wed, 19 May 2010, Lena Palaniyappan wrote:
I want to show a group of 5 labels ach with a different color in tkmedit (Orig.mgz) display can I manipulate the colors of these lables I am able to do this in tksurfer: not tkmedit. Am I missing something?
Cheers Lena _______________________________________________________ Lena Palaniyappan PhD Student & Honorary StR | Division of Psychiatry ( University of Nottingham) South Block 'A' floor| Queens Medical Centre | Nottingham | NG7 2UH
This message has been checked for viruses but the contents of an attachment may still contain software viruses which could damage your computer system: you are advised to perform your own checks. Email communications with the University of Nottingham may be monitored as permitted by UK legislation.
The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Partners Compliance HelpLine at http://www.partners.org/complianceline . If the e-mail was sent to you in error but does not contain patient information, please contact the sender and properly dispose of the e-mail.
_______________________________________________________ Lena Palaniyappan Clinical Lecturer & Honorary StR | Division of Psychiatry ( University of Nottingham) South Block 'A' floor| Queens Medical Centre | Nottingham | NG7 2UH
it should be in our current distribution
On Wed, 19 May 2010, Lena Palaniyappan wrote:
I don't seem to get freeview on commandline - where can I download this?
Thanks LKP
On 19/05/2010 17:47, "Bruce Fischl" fischl@nmr.mgh.harvard.edu wrote:
Hi Lena,
I'm not sure you can do this in tkmedit. You might try freeview instead.
cheers Bruce On Wed, 19 May 2010, Lena Palaniyappan wrote:
I want to show a group of 5 labels ach with a different color in tkmedit (Orig.mgz) display can I manipulate the colors of these lables I am able to do this in tksurfer: not tkmedit. Am I missing something?
Cheers Lena _______________________________________________________ Lena Palaniyappan PhD Student & Honorary StR | Division of Psychiatry ( University of Nottingham) South Block 'A' floor| Queens Medical Centre | Nottingham | NG7 2UH
This message has been checked for viruses but the contents of an attachment may still contain software viruses which could damage your computer system: you are advised to perform your own checks. Email communications with the University of Nottingham may be monitored as permitted by UK legislation.
The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Partners Compliance HelpLine at http://www.partners.org/complianceline . If the e-mail was sent to you in error but does not contain patient information, please contact the sender and properly dispose of the e-mail.
Lena Palaniyappan Clinical Lecturer & Honorary StR | Division of Psychiatry ( University of Nottingham) South Block 'A' floor| Queens Medical Centre | Nottingham | NG7 2UH
Hi Lena
Do you have a Mac? In that case, I can send you an experimental build of freeview if your OS is 10.5.x ( Leopard ). It doesn't work on 10.6.x ( Snow Leopard ) which we are working on.
Best Krish
On May 19, 2010, at 3:37 PM, Bruce Fischl wrote:
it should be in our current distribution
On Wed, 19 May 2010, Lena Palaniyappan wrote:
I don't seem to get freeview on commandline - where can I download this?
Thanks LKP
On 19/05/2010 17:47, "Bruce Fischl" fischl@nmr.mgh.harvard.edu wrote:
Hi Lena,
I'm not sure you can do this in tkmedit. You might try freeview instead.
cheers Bruce On Wed, 19 May 2010, Lena Palaniyappan wrote:
I want to show a group of 5 labels ach with a different color in tkmedit (Orig.mgz) display can I manipulate the colors of these lables I am able to do this in tksurfer: not tkmedit. Am I missing something?
Cheers Lena _______________________________________________________ Lena Palaniyappan PhD Student & Honorary StR | Division of Psychiatry ( University of Nottingham) South Block 'A' floor| Queens Medical Centre | Nottingham | NG7 2UH
This message has been checked for viruses but the contents of an attachment may still contain software viruses which could damage your computer system: you are advised to perform your own checks. Email communications with the University of Nottingham may be monitored as permitted by UK legislation.
The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Partners Compliance HelpLine at http://www.partners.org/complianceline . If the e-mail was sent to you in error but does not contain patient information, please contact the sender and properly dispose of the e-mail.
Lena Palaniyappan Clinical Lecturer & Honorary StR | Division of Psychiatry ( University of Nottingham) South Block 'A' floor| Queens Medical Centre | Nottingham | NG7 2UH
Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
Hi Lena,
Have you tried loading your labels as a segmentation volume? As long as each of your labels has a different voxel value, you can load that label volume as a segmentation, and then make a corresponding color look up table making each label whatever color you want (as long as you can figure out what the RGB values are for that color - there are conversion tables if you search on the internet).
-Tori
On Wed, 19 May 2010, Krish Subramaniam wrote:
Hi Lena
Do you have a Mac? In that case, I can send you an experimental build of freeview if your OS is 10.5.x ( Leopard ). It doesn't work on 10.6.x ( Snow Leopard ) which we are working on.
Best Krish
On May 19, 2010, at 3:37 PM, Bruce Fischl wrote:
it should be in our current distribution
On Wed, 19 May 2010, Lena Palaniyappan wrote:
I don't seem to get freeview on commandline - where can I download this?
Thanks LKP
On 19/05/2010 17:47, "Bruce Fischl" fischl@nmr.mgh.harvard.edu wrote:
Hi Lena,
I'm not sure you can do this in tkmedit. You might try freeview instead.
cheers Bruce On Wed, 19 May 2010, Lena Palaniyappan wrote:
I want to show a group of 5 labels ach with a different color in tkmedit (Orig.mgz) display can I manipulate the colors of these lables I am able to do this in tksurfer: not tkmedit. Am I missing something?
Cheers Lena _______________________________________________________ Lena Palaniyappan PhD Student & Honorary StR | Division of Psychiatry ( University of Nottingham) South Block 'A' floor| Queens Medical Centre | Nottingham | NG7 2UH
This message has been checked for viruses but the contents of an attachment may still contain software viruses which could damage your computer system: you are advised to perform your own checks. Email communications with the University of Nottingham may be monitored as permitted by UK legislation.
The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Partners Compliance HelpLine at http://www.partners.org/complianceline . If the e-mail was sent to you in error but does not contain patient information, please contact the sender and properly dispose of the e-mail.
Lena Palaniyappan Clinical Lecturer & Honorary StR | Division of Psychiatry ( University of Nottingham) South Block 'A' floor| Queens Medical Centre | Nottingham | NG7 2UH
Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
freesurfer@nmr.mgh.harvard.edu
-
Bruce Fischl -
Krish Subramaniam -
Lena Palaniyappan -
Victoria Williams