External Email - Use Caution

Dear Eugenio:

Thank you very much for your quick reply!

Best Regards Xin

On Feb 8, 2021, at 9:59 AM, Iglesias Gonzalez, Juan E. JIGLESIASGONZALEZ@mgh.harvard.edu wrote:

Dear Xin, Please follow the instructions at https://secure-web.cisco.com/1EYatGvoiBwVxNkmp2B8RbXY3nWpO66imPOW4-mVwGnQirp... The new command is: segmentHA_T1_long.sh <baseID> [SUBJECTS_DIR] Kind regards, Eugenio

Juan Eugenio Iglesias Senior research fellow CMIC (UCL), MGH (HMS) and CSAIL (MIT) http://secure-web.cisco.com/1qVHfkGzU51IspGPhTx8HJb3x-csDeMUOKtsRgR5vURTi9VH...

From: freesurfer-bounces@nmr.mgh.harvard.edu on behalf of Xin Qi xinqi2000@gmail.com Reply-To: Freesurfer support list freesurfer@nmr.mgh.harvard.edu Date: Sunday, February 7, 2021 at 10:07 To: "freesurfer@nmr.mgh.harvard.edu" freesurfer@nmr.mgh.harvard.edu Subject: [Freesurfer] Can't find longHippoSubfieldsT1.sh

    External Email - Use Caution        

Dear Freesurfer Community,

I ran the Freesurfer longitudinal pipeline for my subjects (1.5T, T1_data, 6 timepoints each). Now I want to continue with the longitudinal segmentation of hippocampal subfields: MailScanner has detected a possible fraud attempt from "secure-web.cisco.com" claiming to be https://secure-web.cisco.com/1K7bnnF1liM9nEu54_GUeNb3MXa0aKaEV4-Mk91cqBRjfLt...

However, when I want to run the command: longHippoSubfieldsT1.sh <baseID>

I get the error message "bash: longHippoSubfieldsT1.sh: command not found"

First thing I did, was checking the Freesurfer folder for the longHippo..sh file. I am using FS 7.0 but the file is not available.

So my questions: where can I get the file longHippoSubfieldsT1.sh or what else can I do to proceed with the HC subfield segmentation?

Thanks a lot for your support and looking forward to your reply. Best Xin _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://secure-web.cisco.com/1RPYFPXBf79rD1VGQ4al2jkzrRHrRXS9La6AUq7XK8aOcy2...